RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 VWC2LB2RUY7 222 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 SRRM5B3KS81 715 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 NOS1APO75052 506 aaPredicted RBP12.01□□□□□ -0.49
CHD8-208ENST00000555301 RHBDL1O75783 438 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 TFAP2AP05549 437 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 GADD45AP24522 165 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 MYL9P24844 172 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 ALDH3B2P48448 385 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 POU3F4P49335 361 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 BTG1P62324 171 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 PDZK1IP1Q13113 114 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 KCNJ8Q15842 424 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 C22orf42Q6IC83 251 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 SLC25A26Q70HW3 274 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 SATL1Q86VE3 508 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 MUC20Q8N307 709 aaPredicted RBP12.01□□□□□ -0.49
CHD8-208ENST00000555301 ZSCAN4Q8NAM6 433 aaPredicted RBP12.01□□□□□ -0.49
CHD8-208ENST00000555301 POC1AQ8NBT0 407 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 WFDC11Q8NEX6 87 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 FOXRED1Q96CU9 486 aaPredicted RBP12.01□□□□□ -0.49
CHD8-208ENST00000555301 YIPF6Q96EC8 236 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 OR51E2Q9H255 320 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 METTL17Q9H7H0 456 aaPredicted RBP12.01□□□□□ -0.49
CHD8-208ENST00000555301 TXNL4BQ9NX01 149 aaKnown RBP12.01□□□□□ -0.49
CHD8-208ENST00000555301 RASL12Q9NYN1 266 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 PDZD2O15018 2839 aa12.01□□□□□ -0.49
CHD8-208ENST00000555301 TRAV1-2A0A0B4J238 106 aa12□□□□□ -0.49
CHD8-208ENST00000555301 TRAV38-1A0A0B4J264 116 aa12□□□□□ -0.49
CHD8-208ENST00000555301 LGALS8O00214 317 aa12□□□□□ -0.49
CHD8-208ENST00000555301 AKR7A2O43488 359 aa12□□□□□ -0.49
CHD8-208ENST00000555301 SYNGR1O43759 233 aa12□□□□□ -0.49
CHD8-208ENST00000555301 PLATP00750 562 aa12□□□□□ -0.49
CHD8-208ENST00000555301 IGHV2-70P01814 119 aa12□□□□□ -0.49
CHD8-208ENST00000555301 PGA5P0DJD9 388 aa12□□□□□ -0.49
CHD8-208ENST00000555301 GLRA1P23415 457 aa12□□□□□ -0.49
CHD8-208ENST00000555301 MDH2P40926 338 aaKnown RBP12□□□□□ -0.49
CHD8-208ENST00000555301 RPL5P46777 297 aaKnown RBP12□□□□□ -0.49
CHD8-208ENST00000555301 PSMD7P51665 324 aa12□□□□□ -0.49
CHD8-208ENST00000555301 GLT8D1Q68CQ7 371 aa12□□□□□ -0.49
CHD8-208ENST00000555301 GPR141Q7Z602 305 aa12□□□□□ -0.49
CHD8-208ENST00000555301 LRRTM1Q86UE6 522 aa12□□□□□ -0.49
CHD8-208ENST00000555301 LRRC28Q86X40 367 aaPredicted RBP12□□□□□ -0.49
CHD8-208ENST00000555301 Q8IYB0 196 aa12□□□□□ -0.49
CHD8-208ENST00000555301 SAXO1Q8IYX7 474 aa12□□□□□ -0.49
CHD8-208ENST00000555301 JAGN1Q8N5M9 183 aa12□□□□□ -0.49
CHD8-208ENST00000555301 BOLLQ8N9W6 283 aaKnown RBP12□□□□□ -0.49
CHD8-208ENST00000555301 RFT1Q96AA3 541 aa12□□□□□ -0.49
CHD8-208ENST00000555301 CHCHD6Q9BRQ6 235 aa12□□□□□ -0.49
CHD8-208ENST00000555301 UQCC2Q9BRT2 126 aa12□□□□□ -0.49
CHD8-208ENST00000555301 RHOFQ9HBH0 211 aa12□□□□□ -0.49
CHD8-208ENST00000555301 NOTCH2Q04721 2471 aa12□□□□□ -0.49
CHD8-208ENST00000555301 ANKRD17O75179 2603 aaKnown RBP11.99□□□□□ -0.49
CHD8-208ENST00000555301 LOC100506127A0A0U1RQW1 187 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 ISPDA4D126 451 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 OOEPA6NGQ2 149 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 TRAPPC2LH3BP13 241 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 PDCD5O14737 125 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 AIREO43918 545 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 TMEM225BP0DP42 221 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 MUC1P15941 1255 aaPredicted RBP11.99□□□□□ -0.49
CHD8-208ENST00000555301 ZP1P60852 638 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 HNRNPA0Q13151 305 aaKnown RBP11.99□□□□□ -0.49
CHD8-208ENST00000555301 ZMYND11Q15326 602 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 MICBQ29980 383 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 TMEM155Q4W5P6 130 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 AVPI1Q5T686 147 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 TEX36Q5VZQ5 186 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 CRIP3Q6Q6R5 217 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 SPICQ8N5J4 248 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 PXT1Q8NFP0 134 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 OR5D18Q8NGL1 313 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 OR51F2Q8NH61 342 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 TNFAIP8L1Q8WVP5 186 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 TMIGD2Q96BF3 282 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 C12orf43Q96C57 262 aaKnown RBP11.99□□□□□ -0.49
CHD8-208ENST00000555301 CEP19Q96LK0 163 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 KCTD7Q96MP8 289 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 S100A13Q99584 98 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 NRIP2Q9BQI9 281 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 SMURF1Q9HCE7 757 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 MTCH1Q9NZJ7 389 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 DNAJB11Q9UBS4 358 aa11.99□□□□□ -0.49
CHD8-208ENST00000555301 C3orf80F5H4A9 247 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 SPRY1O43609 319 aaPredicted RBP11.98□□□□□ -0.49
CHD8-208ENST00000555301 NDUFA2O43678 99 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 NXPH2O95156 264 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 ZNF205O95201 554 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 EGR1P18146 543 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 ADRA2CP18825 462 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 USF1P22415 310 aaPredicted RBP11.98□□□□□ -0.49
CHD8-208ENST00000555301 CD80P33681 288 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 PTGFRP43088 359 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 RANBP1P43487 201 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 MTNR1BP49286 362 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 SMIM21Q3B7S5 101 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 ZNF404Q494X3 552 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 FAM201AQ5SY85 155 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 SFRP4Q6FHJ7 346 aaPredicted RBP11.98□□□□□ -0.49
CHD8-208ENST00000555301 RNF144BQ7Z419 303 aa11.98□□□□□ -0.49
CHD8-208ENST00000555301 LYPD6Q86Y78 171 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms