RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 OR2T29Q8NH02 315 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 C17orf50Q8WW18 174 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF707Q96C28 371 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 BCL7BQ9BQE9 202 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 NAA50Q9GZZ1 169 aaKnown RBP3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 REEP1Q9H902 201 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 PXDNLA1KZ92 1463 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 ITGB4P16144 1822 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 WNK3Q9BYP7 1800 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 ADAMTS7Q9UKP4 1686 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 PCM1Q15154 2024 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 DOT1LQ8TEK3 1739 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 TNS1Q9HBL0 1735 aaKnown RBP3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 C10orf71Q711Q0 1435 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 IGHV3-72A0A0B4J1Y9 119 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 A0A1B0GUH1 482 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF850A8MQ14 1090 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 HACD1B0YJ81 288 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF701M0R085 212 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 CTNSO60931 367 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 PTHP01270 115 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 GZMAP12544 262 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 POLR2IP36954 125 aaKnown RBP3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR1G1P47890 313 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 NAB1Q13506 487 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 TSC22D1Q15714 1073 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 GUSBP11Q6P575 273 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 LINC00336Q6ZUF6 198 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 SMIM5Q71RC9 77 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 TMEM104Q8NE00 496 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 KCNS3Q9BQ31 491 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 EMC6Q9BV81 110 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 RSPO3Q9BXY4 272 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR2AG1Q9H205 316 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF442Q9H7R0 627 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF835Q9Y2P0 537 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF257Q9Y2Q1 563 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 CHTOPQ9Y3Y2 248 aaKnown RBP3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 CHD8Q9HCK8 2581 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 RREB1Q92766 1687 aa3.13□□□□□ -1.91
CKS1BP1-201ENST00000555221 A0A1W2PRF3 423 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 A0A1W2PRM7 423 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 COLCA2A8K830 154 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 SLC19A2O60779 497 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 RBBP9O75884 186 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 HLA-DQB1P01920 261 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 MT-ND4P03905 459 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 KLK1P06870 262 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 LOXP28300 417 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 TEX30Q5JUR7 227 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 SLC35D2Q76EJ3 337 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 NDUFAF7Q7L592 441 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 NEGR1Q7Z3B1 354 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR2W3Q7Z3T1 314 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 SLC30A8Q8IWU4 369 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF615Q8N8J6 731 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF709Q8N972 641 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 GATSQ8NAP1 163 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR4M1Q8NGD0 313 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR13G1Q8NGZ3 307 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 DEDD2Q8WXF8 326 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 KIAA1143Q96AT1 154 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 KCNS1Q96KK3 526 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 SULT4A1Q9BR01 284 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 CHCHD7Q9BUK0 85 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 IFNKQ9P0W0 207 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 SZT2Q5T011 3432 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 QSER1Q2KHR3 1735 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 ADCY9O60503 1353 aa3.12□□□□□ -1.91
CKS1BP1-201ENST00000555221 CICQ96RK0 1608 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 NUP188Q5SRE5 1749 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 IGLV2-18A0A075B6J9 118 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 IGLV3-12A0A075B6K2 115 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 IGKV1-27A0A075B6S5 117 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 PLIN3O60664 434 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 SERPINB7O75635 380 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 GATBO75879 557 aaKnown RBP3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 LCA5LO95447 670 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 SNAI1O95863 264 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 TGM6O95932 706 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 OTCP00480 354 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 IGLV3-25P01717 112 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 HSPD1P10809 573 aaKnown RBP3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 APLNRP35414 380 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 CCNG1P51959 295 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR1Q1Q15612 314 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 PRSS8Q16651 343 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 NKAIN1Q4KMZ8 207 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 FKBP1CQ5VVH2 108 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 OPN5Q6U736 354 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 HMGN2P46Q86SG4 172 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 ERO1BQ86YB8 467 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 ENKURQ8TC29 256 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 DCAKDQ8WVC6 231 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 GHSRQ92847 366 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 CDS1Q92903 461 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 TIMM29Q9BSF4 260 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 ARMC7Q9H6L4 198 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 FBXO6Q9NRD1 293 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 CES1P1Q9UKY3 287 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms