RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 EMC6Q9BV81 110 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 TMEM185BQ9H7F4 350 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 MRPL15Q9P015 296 aaKnown RBP9.63□□□□□ -0.87
SHMT2-216ENST00000554975 CLCF1Q9UBD9 225 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF391Q9UJN7 358 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 TGP01266 2768 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 IGKV1D-43A0A0B4J1Z2 117 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 A0A0U1RQV5 110 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 TMEM82A0PJX8 343 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 KCNAB3O43448 404 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 EFNA2O43921 213 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 MTRF1O75570 445 aaKnown RBP9.62□□□□□ -0.87
SHMT2-216ENST00000554975 KDM4BO94953 1096 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 OPN1LWP04000 364 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 RLN1P04808 185 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 QDPRP09417 244 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 FAM157CP0CG43 387 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 SUCLG1P53597 346 aaKnown RBP9.62□□□□□ -0.87
SHMT2-216ENST00000554975 TAS2R31P59538 309 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 H3F3AP84243 136 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 PNLIPRP3Q17RR3 467 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 ZBTB37Q5TC79 503 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 AWAT2Q6E213 333 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 VWA1Q6PCB0 445 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 SEZ6L2Q6UXD5 910 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF813Q6ZN06 617 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 CFAP77Q6ZQR2 320 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 ABHD12BQ7Z5M8 362 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-216ENST00000554975 ZDHHC22Q8N966 263 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 CNEP1R1Q8N9A8 125 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 OR9K2Q8NGE7 335 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 KCNG3Q8TAE7 436 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 TMEM171Q8WVE6 324 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 TNFAIP8L1Q8WVP5 186 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 SPTSSAQ969W0 71 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 FGGYQ96C11 551 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 PGAM5Q96HS1 289 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 NPAS1Q99742 590 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 PRRG4Q9BZD6 226 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 ULBP2Q9BZM5 246 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 CST11Q9H112 138 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 PIGMQ9H3S5 423 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 IFT46Q9NQC8 304 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 ASH2LQ9UBL3 628 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 CGGBP1Q9UFW8 167 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-216ENST00000554975 FLVCR1Q9Y5Y0 555 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 TENM1Q9UKZ4 2725 aa9.62□□□□□ -0.87
SHMT2-216ENST00000554975 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-216ENST00000554975 F5H5P2 479 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 DHHO43323 396 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 OR2A4O95047 310 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 AMY2AP04746 511 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF93P35789 620 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-216ENST00000554975 HTR2BP41595 481 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF81P51508 661 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 EFNB2P52799 333 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 CLDN15P56746 228 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF121P58317 390 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-216ENST00000554975 RAC3P60763 192 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 TSPAN5P62079 268 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 MRPS34P82930 218 aaKnown RBP9.61□□□□□ -0.87
SHMT2-216ENST00000554975 SCRN3Q0VDG4 424 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 GK2Q14410 553 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-216ENST00000554975 LAMTOR1Q6IAA8 161 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 OR2A2Q6IF42 318 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 FAHD2BQ6P2I3 314 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-216ENST00000554975 CORO6Q6QEF8 472 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 Q6ZTK2 550 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 LYPD6Q86Y78 171 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 OR8B12Q8NGG6 310 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 OR56B1Q8NGI3 324 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 OR51A2Q8NGJ7 313 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 OR10S1Q8NGN2 331 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 OR1J2Q8NGS2 313 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 OR13C9Q8NGT0 318 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 AQP3Q92482 292 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 SNAPC3Q92966 411 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 STARD4Q96DR4 205 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 SEH1LQ96EE3 360 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 FAHD2AQ96GK7 314 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF845Q96IR2 970 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-216ENST00000554975 OR2A7Q96R45 310 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 OPN3Q9H1Y3 402 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-216ENST00000554975 ELF5Q9UKW6 265 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-216ENST00000554975 MRPS28Q9Y2Q9 187 aaKnown RBP9.61□□□□□ -0.87
SHMT2-216ENST00000554975 BOLA1Q9Y3E2 137 aa9.61□□□□□ -0.87
SHMT2-216ENST00000554975 MGAM2Q2M2H8 2515 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 A0A1B0GW55 424 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 TMEM14DPA8MWL7 114 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 H3BSH0 61 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 H3BUI4 141 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 MSTNO14793 375 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 SYNGR4O95473 234 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 THBDP07204 575 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 HCKP08631 526 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 DUX4L2P0CJ85 424 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 DUX4L3P0CJ86 424 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 DUX4L4P0CJ87 422 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 DUX4L5P0CJ88 424 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 DUX4L6P0CJ89 424 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms