RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 EMC7Q9NPA0 242 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 OR5V1Q9UGF6 321 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 STEAP1Q9UHE8 339 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 KCNS2Q9ULS6 477 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 POLR1DQ9Y2S0 133 aa10.59□□□□□ -0.71
SHMT2-214ENST00000554604 IGLV3-9A0A075B6K5 115 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 LOC107986453A0A1B0GWG9 222 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 MEGF11A6BM72 1044 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 C17orf100A8MU93 164 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 SLC17A2O00624 439 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 TPD52L2O43399 206 aaKnown RBP10.58□□□□□ -0.72
SHMT2-214ENST00000554604 TGFAP01135 160 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 MAS1P04201 325 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 TRAPPC2P0DI81 140 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 TRAPPC2BP0DI82 140 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 MRPS10P82664 201 aaKnown RBP10.58□□□□□ -0.72
SHMT2-214ENST00000554604 SCRN3Q0VDG4 424 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 ENDOGQ14249 297 aaKnown RBP10.58□□□□□ -0.72
SHMT2-214ENST00000554604 ODF4Q2M2E3 257 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 PCGF3Q3KNV8 242 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 ELFN2Q5R3F8 820 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 SPATA46Q5T0L3 261 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 ZNF57Q68EA5 555 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-214ENST00000554604 CFAP77Q6ZQR2 320 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 C1orf174Q8IYL3 243 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 ZNF101Q8IZC7 436 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 PPP1R14AQ96A00 147 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 HAVCR1Q96D42 359 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 S100A16Q96FQ6 103 aaKnown RBP10.58□□□□□ -0.72
SHMT2-214ENST00000554604 C7orf50Q9BRJ6 194 aaKnown RBP10.58□□□□□ -0.72
SHMT2-214ENST00000554604 PLEKHA1Q9HB21 404 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 CKLFQ9UBR5 152 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 LPAR3Q9UBY5 353 aa10.58□□□□□ -0.72
SHMT2-214ENST00000554604 NUFIP1Q9UHK0 495 aaKnown RBP10.58□□□□□ -0.72
SHMT2-214ENST00000554604 PLSCR5A0PG75 271 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 DOK2O60496 412 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 LILRA1O75019 489 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 IGHV3-13P01766 116 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 TTRP02766 147 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 COL8A2P25067 703 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 WNT5AP41221 380 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 GPR6P46095 362 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-214ENST00000554604 HTR5AP47898 357 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 PPP1CBP62140 327 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 GRB2P62993 217 aaKnown RBP10.57□□□□□ -0.72
SHMT2-214ENST00000554604 CCL8P80075 99 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 GLT8D1Q68CQ7 371 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 ASPHD2Q6ICH7 369 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 PLET1Q6UQ28 207 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 AKAP14Q86UN6 197 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 OR13C3Q8NGS6 347 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 SLC25A40Q8TBP6 338 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 SMIM4Q8WVI0 70 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 HPS1Q92902 700 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 YIPF5Q969M3 257 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 PNRC2Q9NPJ4 139 aaKnown RBP10.57□□□□□ -0.72
SHMT2-214ENST00000554604 DECR2Q9NUI1 292 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 DDX28Q9NUL7 540 aaKnown RBP10.57□□□□□ -0.72
SHMT2-214ENST00000554604 TMEM160Q9NX00 188 aa10.57□□□□□ -0.72
SHMT2-214ENST00000554604 ANK3Q12955 4377 aaKnown RBP10.56□□□□□ -0.72
SHMT2-214ENST00000554604 FAM240BA0A1B0GVZ2 78 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 MEIOCA2RUB1 952 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 A6NIN4 97 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 PPIHO43447 177 aaKnown RBP10.56□□□□□ -0.72
SHMT2-214ENST00000554604 SGCEO43556 437 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 LANCL1O43813 399 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 CDC14BO60729 498 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 ACSM4P0C7M7 580 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 FAM157CP0CG43 387 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 HNF1AP20823 631 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 HSD11B1P28845 292 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 ZNF81P51508 661 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 CLDN12P56749 244 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 TMEM33P57088 247 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 HIST1H3AP68431 136 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 MRPS11P82912 194 aaKnown RBP10.56□□□□□ -0.72
SHMT2-214ENST00000554604 GPR176Q14439 515 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 TAF13Q15543 124 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 RAB11BQ15907 218 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 HIST2H3PS2Q5TEC6 136 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 RFPL4BQ6ZWI9 263 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 HIST2H3AQ71DI3 136 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 NKAIN3Q8N8D7 197 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 DTX3Q8N9I9 347 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 DNAAF1Q8NEP3 725 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 KLF14Q8TD94 323 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-214ENST00000554604 MARS2Q96GW9 593 aaKnown RBP10.56□□□□□ -0.72
SHMT2-214ENST00000554604 OR2J1Q9GZK6 312 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 PBOV1Q9GZY1 135 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 MMP28Q9H239 520 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 NARFLQ9H6Q4 476 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 ZNF275Q9NSD4 429 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-214ENST00000554604 PLEK2Q9NYT0 353 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 ASH2LQ9UBL3 628 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 CACNG2Q9Y698 323 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 DYSFO75923 2080 aa10.56□□□□□ -0.72
SHMT2-214ENST00000554604 HMX3A6NHT5 357 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 CENPXA8MT69 81 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 GABARAPH6UMI1 98 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 P2RY10O00398 339 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms