RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 DUX5Q96PT3 197 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 ALG8Q9BVK2 526 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 DNTTIP1Q9H147 329 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 SLC25A10Q9UBX3 287 aaPredicted RBP8.83□□□□□ -1
SHMT2-213ENST00000554600 RPUSD1Q9UJJ7 312 aaKnown RBP8.83□□□□□ -1
SHMT2-213ENST00000554600 EXOGQ9Y2C4 368 aaKnown RBP8.83□□□□□ -1
SHMT2-213ENST00000554600 POLDIP2Q9Y2S7 368 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 A0A1W2PQ09 198 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 PQLC2LA1A4F0 135 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 E9PQ18 207 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 J3QRE1 110 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 FCN3O75636 299 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 PSG2P11465 335 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 GABRB1P18505 474 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 AMY2BP19961 511 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 TGM4P49221 684 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 CNN3Q15417 329 aaKnown RBP8.82□□□□□ -1
SHMT2-213ENST00000554600 KLHL22Q53GT1 634 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 ATPAF1Q5TC12 328 aaPredicted RBP8.82□□□□□ -1
SHMT2-213ENST00000554600 RUSC1-AS1Q66K80 236 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 TMEM42Q69YG0 159 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 ACP7Q6ZNF0 438 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 ZNF788Q6ZQV5 615 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 KRT74Q7RTS7 529 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 ANGPTL5Q86XS5 388 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 PDZD9Q8IXQ8 264 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 CMTM4Q8IZR5 234 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 ZNF676Q8N7Q3 588 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 POC1AQ8NBT0 407 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 CCDC54Q8NEL0 328 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 ANGPTL6Q8NI99 470 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 ZFAND2BQ8WV99 257 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 GCDHQ92947 438 aaPredicted RBP8.82□□□□□ -1
SHMT2-213ENST00000554600 LHX4Q969G2 390 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 ZDHHC16Q969W1 377 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 BORCS8Q96FH0 119 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 RDH12Q96NR8 316 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 TBX15Q96SF7 602 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 CNTD2Q9H8S5 307 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 ESM1Q9NQ30 184 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 OR14J1Q9UGF5 321 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 MYRFQ9Y2G1 1151 aa8.82□□□□□ -1
SHMT2-213ENST00000554600 RPL36Q9Y3U8 105 aaKnown RBP8.82□□□□□ -1
SHMT2-213ENST00000554600 SOX21Q9Y651 276 aaPredicted RBP8.82□□□□□ -1
SHMT2-213ENST00000554600 TENM1Q9UKZ4 2725 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 IGKV1D-17A0A075B6S4 117 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 DNAJC9-AS1A6NH13 148 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 RFPL4AA6NLU0 287 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 RFPL4AL1F8VTS6 287 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 HAX1O00165 279 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 GPR37O15354 613 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 SIGLEC5O15389 551 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 CLIC3O95833 236 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 ACAA1P09110 424 aaPredicted RBP8.81□□□□□ -1
SHMT2-213ENST00000554600 PEX2P28328 305 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 CEBPDP49716 269 aaPredicted RBP8.81□□□□□ -1
SHMT2-213ENST00000554600 FUT6P51993 359 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 NANOS3P60323 173 aaKnown RBP8.81□□□□□ -1
SHMT2-213ENST00000554600 ISL1P61371 349 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 UBA52P62987 128 aaKnown RBP8.81□□□□□ -1
SHMT2-213ENST00000554600 RAB40BQ12829 278 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 GALEQ14376 348 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 UBE2V2Q15819 145 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 DGUOKQ16854 277 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 C11orf91Q3C1V1 193 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 C12orf54Q6X4T0 127 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 CALHM1Q8IU99 346 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 FAM185AQ8N0U4 392 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 ZDHHC22Q8N966 263 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 ZNRF1Q8ND25 227 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 OR52I1Q8NGK6 324 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 OR13C3Q8NGS6 347 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 FGGYQ96C11 551 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 PELI1Q96FA3 418 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 ZNF48Q96MX3 618 aaPredicted RBP8.81□□□□□ -1
SHMT2-213ENST00000554600 DCTN5Q9BTE1 182 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 CHST5Q9GZS9 411 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 SIRPDQ9H106 197 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 ELL3Q9HB65 397 aaPredicted RBP8.81□□□□□ -1
SHMT2-213ENST00000554600 C8orf4Q9NR00 106 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 SIRT7Q9NRC8 400 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 ERVK13-1Q9NX77 482 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 RASL12Q9NYN1 266 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 FRRS1LQ9P0K9 344 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 HHLA2Q9UM44 414 aa8.81□□□□□ -1
SHMT2-213ENST00000554600 MDFIC2A0A1B0GVS7 189 aa8.8□□□□□ -1
SHMT2-213ENST00000554600 ERICH4A6NGS2 130 aa8.8□□□□□ -1
SHMT2-213ENST00000554600 SLC1A7O00341 560 aa8.8□□□□□ -1
SHMT2-213ENST00000554600 CYB5AP00167 134 aa8.8□□□□□ -1
SHMT2-213ENST00000554600 PGA5P0DJD9 388 aa8.8□□□□□ -1
SHMT2-213ENST00000554600 POU3F4P49335 361 aa8.8□□□□□ -1
SHMT2-213ENST00000554600 GBX2P52951 348 aaPredicted RBP8.8□□□□□ -1
SHMT2-213ENST00000554600 ATP1B3P54709 279 aa8.8□□□□□ -1
SHMT2-213ENST00000554600 PRB3Q04118 309 aaPredicted RBP8.8□□□□□ -1
SHMT2-213ENST00000554600 ALKBH1Q13686 389 aaKnown RBP8.8□□□□□ -1
SHMT2-213ENST00000554600 PDCD1Q15116 288 aa8.8□□□□□ -1
SHMT2-213ENST00000554600 SMN1Q16637 294 aaKnown RBP8.8□□□□□ -1
SHMT2-213ENST00000554600 TTC23Q5W5X9 447 aa8.8□□□□□ -1
SHMT2-213ENST00000554600 FDX2Q6P4F2 183 aa8.8□□□□□ -1
SHMT2-213ENST00000554600 Q6ZSR3 168 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms