RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 CYSLTR2Q9NS75 346 aa13.89□□□□□ -0.19
NEK9-204ENST00000554258 CHCHD3Q9NX63 227 aaKnown RBP13.89□□□□□ -0.19
NEK9-204ENST00000554258 VPREB3Q9UKI3 123 aa13.89□□□□□ -0.19
NEK9-204ENST00000554258 TMEM269A0A1B0GVZ9 245 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 J3QLW9 94 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 P2RY10O00398 339 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 IGLV3-1P01715 115 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 LCATP04180 440 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 CD55P08174 381 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 ZNF19P17023 458 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 CPT2P23786 658 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 TGM4P49221 684 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 KRTAP10-11P60412 298 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 PPP1CBP62140 327 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 ZNF829Q3KNS6 432 aaPredicted RBP13.88□□□□□ -0.19
NEK9-204ENST00000554258 SNAI3Q3KNW1 292 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 ZBTB37Q5TC79 503 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 OR2G6Q5TZ20 316 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 FBXW12Q6X9E4 464 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 TMPRSS11AQ6ZMR5 421 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 CATSPERDQ86XM0 798 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 SCCPDHQ8NBX0 429 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 OR52H1Q8NGJ2 320 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 OR5L1Q8NGL2 311 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 ABHD4Q8TB40 342 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 SPRYD4Q8WW59 207 aaPredicted RBP13.88□□□□□ -0.19
NEK9-204ENST00000554258 SPSB4Q96A44 273 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 POFUT1Q9H488 388 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 BABAM2Q9NXR7 383 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 NUFIP1Q9UHK0 495 aaKnown RBP13.88□□□□□ -0.19
NEK9-204ENST00000554258 GNG8Q9UK08 70 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 LSM2Q9Y333 95 aaKnown RBP13.88□□□□□ -0.19
NEK9-204ENST00000554258 SNX5Q9Y5X3 404 aa13.88□□□□□ -0.19
NEK9-204ENST00000554258 IGHV1-69DA0A0B4J2H0 117 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 IGHV1-69P01742 117 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 SLC2A1P11166 492 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 LIPAP38571 399 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 CCR9P51686 369 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 EFNB2P52799 333 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 MFGE8Q08431 387 aaPredicted RBP13.87□□□□□ -0.19
NEK9-204ENST00000554258 ACSM1Q08AH1 577 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 ZNF718Q3SXZ3 478 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 MBNL2Q5VZF2 373 aaKnown RBP13.87□□□□□ -0.19
NEK9-204ENST00000554258 Q6ZSR3 168 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 FAM220AQ7Z4H9 259 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 ELMOD2Q8IZ81 293 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 OR2G2Q8NGZ5 317 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 SLC25A40Q8TBP6 338 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 RPS4Y2Q8TD47 263 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 ITFG2Q969R8 447 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 SGK3Q96BR1 496 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 NR1H4Q96RI1 486 aaPredicted RBP13.87□□□□□ -0.19
NEK9-204ENST00000554258 PBOV1Q9GZY1 135 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 MOB1AQ9H8S9 216 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 MIOXQ9UGB7 285 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 OR52A1Q9UKL2 312 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 ERGIC3Q9Y282 383 aa13.87□□□□□ -0.19
NEK9-204ENST00000554258 A0A0U1RQV5 110 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 E9PI62 339 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 LOC110117498-PIK3R3F6TDL0 507 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 RNASEK-C17orf49H0YIS7 233 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 OGG1O15527 345 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 RPP14O95059 124 aaKnown RBP13.86□□□□□ -0.19
NEK9-204ENST00000554258 ANXA2P07355 339 aaKnown RBP13.86□□□□□ -0.19
NEK9-204ENST00000554258 CFHR2P36980 270 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 MPV17P39210 176 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 WNT4P56705 351 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 NANOS3P60323 173 aaKnown RBP13.86□□□□□ -0.19
NEK9-204ENST00000554258 DCTN2Q13561 401 aaKnown RBP13.86□□□□□ -0.19
NEK9-204ENST00000554258 CCDC58Q4VC31 144 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 ZMAT1Q5H9K5 638 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 TMEM255AQ5JRV8 349 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 SPATA46Q5T0L3 261 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 C1orf122Q6ZSJ8 110 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 FAM57BQ71RH2 274 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 PRSS35Q8N3Z0 413 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 OR8B12Q8NGG6 310 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 KLF14Q8TD94 323 aaPredicted RBP13.86□□□□□ -0.19
NEK9-204ENST00000554258 HAVCR1Q96D42 359 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 NEIL1Q96FI4 390 aaPredicted RBP13.86□□□□□ -0.19
NEK9-204ENST00000554258 OR2J1Q9GZK6 312 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 OR10A2Q9H208 303 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 RGCCQ9H4X1 137 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 CNTD2Q9H8S5 307 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 MSL2Q9HCI7 577 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 ZNF391Q9UJN7 358 aa13.86□□□□□ -0.19
NEK9-204ENST00000554258 TRIM64CA6NLI5 447 aa13.85□□□□□ -0.19
NEK9-204ENST00000554258 OR4C45A6NMZ5 311 aa13.85□□□□□ -0.19
NEK9-204ENST00000554258 XRCC2O43543 280 aa13.85□□□□□ -0.19
NEK9-204ENST00000554258 TOX4O94842 621 aa13.85□□□□□ -0.19
NEK9-204ENST00000554258 TNFAIP8O95379 198 aa13.85□□□□□ -0.19
NEK9-204ENST00000554258 LALBAP00709 142 aa13.85□□□□□ -0.19
NEK9-204ENST00000554258 TTRP02766 147 aa13.85□□□□□ -0.19
NEK9-204ENST00000554258 RAC2P15153 192 aa13.85□□□□□ -0.19
NEK9-204ENST00000554258 EEF1B2P24534 225 aaKnown RBP13.85□□□□□ -0.19
NEK9-204ENST00000554258 PSMB10P40306 273 aa13.85□□□□□ -0.19
NEK9-204ENST00000554258 KIR3DL2P43630 455 aa13.85□□□□□ -0.19
NEK9-204ENST00000554258 GBX2P52951 348 aaPredicted RBP13.85□□□□□ -0.19
NEK9-204ENST00000554258 ALKBH1Q13686 389 aaKnown RBP13.85□□□□□ -0.19
NEK9-204ENST00000554258 TBCEQ15813 527 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms