RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CDC20BQ86Y33 519 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 TMEM256Q8N2U0 113 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 NUP43Q8NFH3 380 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 OR5D18Q8NGL1 313 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 GRHL3Q8TE85 626 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 RHBDD1Q8TEB9 315 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 ALG12Q9BV10 488 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 ZDHHC6Q9H6R6 413 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 MRPL22Q9NWU5 206 aaKnown RBP8.41□□□□□ -1.06
SIX4-202ENST00000554079 AK3Q9UIJ7 227 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 ENTPD2Q9Y5L3 495 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 A0A0A6YYD5 115 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 ARL5CA6NH57 179 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 FGF17O60258 216 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 B3GAT3O94766 335 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 NDUFB2O95178 105 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 TYMSP04818 313 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 FSTP19883 344 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 PTGER4P35408 488 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 NHLH1Q02575 133 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 TAF10Q12962 218 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 GPR157Q5UAW9 335 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 OR51G1Q8NGK1 321 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 GLYATL1Q969I3 302 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 IL22RA2Q969J5 263 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 CTHRC1Q96CG8 243 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 RBMXL1Q96E39 390 aaKnown RBP8.41□□□□□ -1.06
SIX4-202ENST00000554079 CNRIP1Q96F85 164 aaPredicted RBP8.41□□□□□ -1.06
SIX4-202ENST00000554079 LOXL4Q96JB6 756 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 HIPK2Q9H2X6 1198 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 PLK3Q9H4B4 646 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 CALHM2Q9HA72 323 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 TMEM9BQ9NQ34 198 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 TAS2R4Q9NYW5 299 aa8.41□□□□□ -1.06
SIX4-202ENST00000554079 A0A1B0GUS0 222 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 MBLAC1A4D2B0 266 aaPredicted RBP8.4□□□□□ -1.06
SIX4-202ENST00000554079 NDUFS4O43181 175 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 LILRA1O75019 489 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 CD33P20138 364 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 BMP5P22003 454 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 ATP6V0CP27449 155 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 CDKN1AP38936 164 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 ZNF41P51814 821 aaPredicted RBP8.4□□□□□ -1.06
SIX4-202ENST00000554079 BIDP55957 195 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 ARF6P62330 175 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 RPL23AP62750 156 aaKnown RBP8.4□□□□□ -1.06
SIX4-202ENST00000554079 TRA2BP62995 288 aaKnown RBP8.4□□□□□ -1.06
SIX4-202ENST00000554079 C1orf100Q5SVJ3 147 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 NBPF12Q5TAG4 269 aaPredicted RBP8.4□□□□□ -1.06
SIX4-202ENST00000554079 C1QL3Q5VWW1 255 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 FDX2Q6P4F2 183 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 LYPD6Q86Y78 171 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 IL22RA1Q8N6P7 574 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 ZFP62Q8NB50 900 aaPredicted RBP8.4□□□□□ -1.06
SIX4-202ENST00000554079 OR13G1Q8NGZ3 307 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 OR2G3Q8NGZ4 309 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 FNDC9Q8TBE3 224 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 TMEM234Q8WY98 164 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 TIFAQ96CG3 184 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 RASD2Q96D21 266 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 ZNF700Q9H0M5 742 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 MTHFD2LQ9H903 347 aaPredicted RBP8.4□□□□□ -1.06
SIX4-202ENST00000554079 Q9N2K0 584 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 C1orf123Q9NWV4 160 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 ADAM29Q9UKF5 820 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 OR51B4Q9Y5P0 310 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 MPDZO75970 2070 aa8.4□□□□□ -1.06
SIX4-202ENST00000554079 GLOD5A6NK44 160 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 SEMA4FO95754 770 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 PDGFBP01127 241 aaPredicted RBP8.39□□□□□ -1.07
SIX4-202ENST00000554079 CT45A8P0DMV1 189 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 CT45A9P0DMV2 189 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 ACRP10323 421 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 TCN2P20062 427 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 TUBG1P23258 451 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 GLRA1P23415 457 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 VIPR2P41587 438 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 ACAA2P42765 397 aaKnown RBP8.39□□□□□ -1.07
SIX4-202ENST00000554079 SPINT3P49223 89 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 VEGFBP49765 207 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 VASPP50552 380 aaPredicted RBP8.39□□□□□ -1.07
SIX4-202ENST00000554079 RAB11AP62491 216 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 PLAURQ03405 335 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 CT45A2Q5DJT8 189 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 MRPL2Q5T653 305 aaKnown RBP8.39□□□□□ -1.07
SIX4-202ENST00000554079 LCN10Q6JVE6 187 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 S100A7AQ86SG5 101 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 OR2I1PQ8NGU4 316 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 OR14C36Q8NHC7 312 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 NKD1Q969G9 470 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 FAM46BQ96A09 425 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 MRPL24Q96A35 216 aaKnown RBP8.39□□□□□ -1.07
SIX4-202ENST00000554079 ZNF845Q96IR2 970 aaPredicted RBP8.39□□□□□ -1.07
SIX4-202ENST00000554079 SUSD3Q96L08 255 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 CAPNS2Q96L46 248 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 ADOQ96SZ5 270 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 ZBP1Q9H171 429 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 GPR84Q9NQS5 396 aa8.39□□□□□ -1.07
SIX4-202ENST00000554079 LYRM2Q9NU23 88 aaPredicted RBP8.39□□□□□ -1.07
SIX4-202ENST00000554079 MRPS28Q9Y2Q9 187 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms