RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 OR13D1Q8NGV5 346 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 OR2AJ1Q8NGZ0 328 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 CAPSLQ8WWF8 208 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 RPL3LQ92901 407 aaKnown RBP5.39□□□□□ -1.55
ATXN3-224ENST00000554040 SPSB4Q96A44 273 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 SDSLQ96GA7 329 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 RAX2Q96IS3 184 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 MICU1Q9BPX6 476 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 PPP1R3EQ9H7J1 279 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 NRIP3Q9NQ35 241 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 ZNF222Q9UK12 451 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 BAG5Q9UL15 447 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 MINOS1-NBL1R4GNA1 71 aa5.39□□□□□ -1.55
ATXN3-224ENST00000554040 SH2D7A6NKC9 451 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-224ENST00000554040 C17orf98A8MV24 154 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 SEC14L6B5MCN3 397 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 SNNO75324 88 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-224ENST00000554040 SCAF4O95104 1147 aaKnown RBP5.38□□□□□ -1.55
ATXN3-224ENST00000554040 LY86O95711 162 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 TXNDC12O95881 172 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 AMY1AP04745 511 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 FRMD6-AS1P0C7T7 363 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 CCL3L1P16619 93 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 GLRA1P23415 457 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 IFNA8P32881 189 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 OR1E2P47887 323 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 CAPZA1P52907 286 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 MTPNP58546 118 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 STX1BP61266 288 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 FAM3AP98173 230 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 IFFO1Q0D2I5 559 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 ZNF273Q14593 569 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 AGBL2Q5U5Z8 902 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 PLBD1Q6P4A8 553 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 DHDDSQ86SQ9 333 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 EGFL6Q8IUX8 553 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 ZNF695Q8IW36 515 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 RNF113BQ8IZP6 322 aaKnown RBP5.38□□□□□ -1.55
ATXN3-224ENST00000554040 DPP10Q8N608 796 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 KLHL30-AS1Q8NEE0 82 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 OR4M1Q8NGD0 313 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 OR2T27Q8NH04 317 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 OR10A6Q8NH74 314 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 RBM14Q96PK6 669 aaKnown RBP5.38□□□□□ -1.55
ATXN3-224ENST00000554040 DUX3Q96PT4 197 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 GPX7Q96SL4 187 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-224ENST00000554040 CGREF1Q99674 301 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 TM2D3Q9BRN9 247 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 NDEL1Q9GZM8 345 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 KAT8Q9H7Z6 458 aaKnown RBP5.38□□□□□ -1.55
ATXN3-224ENST00000554040 YY1AP1Q9H869 796 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 SP140LQ9H930 580 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 CCDC167Q9P0B6 97 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 DKK2Q9UBU2 259 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 IER3IP1Q9Y5U9 82 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 LYVE1Q9Y5Y7 322 aa5.38□□□□□ -1.55
ATXN3-224ENST00000554040 VPS13DQ5THJ4 4388 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 A0A087WUU8 490 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 TMEM210A6NLX4 147 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 SOCS2O14508 198 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 LDLRAD4O15165 306 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 XRCC2O43543 280 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 OR2F2O95006 317 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 NDUFB2O95178 105 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 MYF6P23409 242 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 CD24P25063 80 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 GPR4P46093 362 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 OR3A4PP47883 348 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 GZMMP51124 257 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 SLC7A2P52569 658 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 DLX6P56179 175 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 DYNC1I2Q13409 638 aaKnown RBP5.37□□□□□ -1.55
ATXN3-224ENST00000554040 TRAM2Q15035 370 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 ZNF260Q3ZCT1 412 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 LCN8Q6JVE9 175 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 TBPL2Q6SJ96 375 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 DPY19L2P2Q6ZN68 376 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 TMPRSS11FQ6ZWK6 438 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 SLC16A9Q7RTY1 509 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 BCAS4Q8TDM0 211 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 CHPT1Q8WUD6 406 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 DDB2Q92466 427 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 STMN2Q93045 179 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 SGK3Q96BR1 496 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 PRRC1Q96M27 445 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 C16orf45Q96MC5 204 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-224ENST00000554040 PAIP2Q9BPZ3 127 aaKnown RBP5.37□□□□□ -1.55
ATXN3-224ENST00000554040 SLC25A33Q9BSK2 321 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 PAPOLGQ9BWT3 736 aaKnown RBP5.37□□□□□ -1.55
ATXN3-224ENST00000554040 RHBDD3Q9Y3P4 386 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 N6AMT1Q9Y5N5 214 aa5.37□□□□□ -1.55
ATXN3-224ENST00000554040 RFPL4AA6NLU0 287 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 ANXA2P2A6NMY6 339 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 RFPL4AL1F8VTS6 287 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 M0QZK8 103 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 MTRF1O75570 445 aaKnown RBP5.36□□□□□ -1.55
ATXN3-224ENST00000554040 NUDT3O95989 172 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 IFNA14P01570 189 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 HLA-DQA2P01906 255 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 RBP4P02753 201 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms