RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 SMIM6P0DI80 62 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 C1GALT1C1LP0DN25 315 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 LIPCP11150 499 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 ALOX5APP20292 161 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 GABRR1P24046 479 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 F2RP25116 425 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 SLC6A1P30531 599 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 GRPRP30550 384 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 CA5AP35218 305 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 TALDO1P37837 337 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 KIR2DS4P43632 304 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 AQP5P55064 265 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 RAB25P57735 213 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 RAB8AP61006 207 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 RAP1BP61224 184 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 PAFAH1B2P68402 229 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 ELF3P78545 371 aaPredicted RBP2.88□□□□□ -1.95
TDP1-207ENST00000553617 TSNQ15631 228 aaKnown RBP2.88□□□□□ -1.95
TDP1-207ENST00000553617 HIGD2BQ4VC39 106 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 FBXO16Q8IX29 292 aaPredicted RBP2.88□□□□□ -1.95
TDP1-207ENST00000553617 WDR31Q8NA23 367 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 DUSP18Q8NEJ0 188 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 SLC26A10Q8NG04 563 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 OR2M7Q8NG81 312 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 OR4F15Q8NGB8 312 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 OR10A6Q8NH74 314 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 PYROXD1Q8WU10 500 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 RNF138Q8WVD3 245 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 FGF11Q92914 225 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 SLC25A38Q96DW6 304 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 L3HYPDHQ96EM0 354 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 CMTM7Q96FZ5 175 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 PDXPQ96GD0 296 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 APOL4Q9BPW4 351 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 TCEAL7Q9BRU2 100 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 PECRQ9BY49 303 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 SELENOIQ9C0D9 397 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 C20orf85Q9H1P6 137 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 MIXL1Q9H2W2 232 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 MAP1LC3AQ9H492 121 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 ZNF702PQ9H963 129 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 HRASLS2Q9NWW9 162 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 COA4Q9NYJ1 87 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 UFC1Q9Y3C8 167 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 CHD5Q8TDI0 1954 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 SNAPC4Q5SXM2 1469 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 ZNF518AQ6AHZ1 1483 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 CLUHO75153 1309 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 KDM5BQ9UGL1 1544 aa2.88□□□□□ -1.95
TDP1-207ENST00000553617 ERBINQ96RT1 1412 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 CAMSAP1Q5T5Y3 1602 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 IGLV3-22A0A075B6J6 115 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 TGIF2-C20orf24A0A0A6YYL0 155 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 A0A1B0GW55 424 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 PPP5D1E7EU14 171 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 H7C2Y5 167 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 ERI3O43414 337 aaKnown RBP2.87□□□□□ -1.95
TDP1-207ENST00000553617 LSM8O95777 96 aaKnown RBP2.87□□□□□ -1.95
TDP1-207ENST00000553617 CLIC3O95833 236 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 GCGP01275 180 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 IFNGP01579 166 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 IGHV2-5P01817 119 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 TACSTD2P09758 323 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 ACSM4P0C7M7 580 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 DUX4L2P0CJ85 424 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 DUX4L3P0CJ86 424 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 DUX4L4P0CJ87 422 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 DUX4L5P0CJ88 424 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 DUX4L6P0CJ89 424 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 DUX4L7P0CJ90 424 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 CD1EP15812 388 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 TBPP20226 339 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 GZMHP20718 246 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 HTR1DP28221 377 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 AKR1C3P42330 323 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 VEGFCP49767 419 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 KLK7P49862 253 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 SULT1A1P50225 295 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 SULT1A2P50226 295 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 FBXW4P57775 412 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 KRTAP10-6P60371 365 aaPredicted RBP2.87□□□□□ -1.95
TDP1-207ENST00000553617 NUTF2P61970 127 aaKnown RBP2.87□□□□□ -1.95
TDP1-207ENST00000553617 BCL2L1Q07817 233 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 ZNF763Q0D2J5 394 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 TWF1Q12792 350 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 GUSBP1Q15486 140 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 OR1Q1Q15612 314 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 TRAM1Q15629 374 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 LPAL2Q16609 132 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 SMIM21Q3B7S5 101 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 CEACAM21Q3KPI0 293 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 PRR30Q53SZ7 412 aaPredicted RBP2.87□□□□□ -1.95
TDP1-207ENST00000553617 TCTEX1D4Q5JR98 221 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 CPTPQ5TA50 214 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 N4BP2L1Q5TBK1 243 aaPredicted RBP2.87□□□□□ -1.95
TDP1-207ENST00000553617 CST9Q5W186 159 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 FAM71E1Q6IPT2 247 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 LPCAT3Q6P1A2 487 aa2.87□□□□□ -1.95
TDP1-207ENST00000553617 DUX4L9Q6RFH8 374 aaPredicted RBP2.87□□□□□ -1.95
TDP1-207ENST00000553617 GRINAQ7Z429 371 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms