RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 FCER2P06734 321 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 OR4E1P0C645 316 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 PATE4P0C8F1 98 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 MGMTP16455 207 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 S100A1P23297 94 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 CPT2P23786 658 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 RFC3P40938 356 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 OR3A2P47893 321 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 RBP2P50120 134 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 ATP1B3P54709 279 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 MTCP1P56278 107 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 CXADRP78310 365 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 ARG2P78540 354 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF92Q03936 586 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 SRYQ05066 204 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 GUSBP1Q15486 140 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 GRK1Q15835 563 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 LGALSLQ3ZCW2 172 aaPredicted RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 SLC22A6Q4U2R8 563 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 RNASE10Q5GAN6 216 aaKnown RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 SFRP5Q5T4F7 317 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 ATPAF1Q5TC12 328 aaPredicted RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 FBXW9Q5XUX1 488 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 TMEM53Q6P2H8 277 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 IGFL3Q6UXB1 125 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 CHMP1BQ7LBR1 199 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 HOGA1Q86XE5 327 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 MCEMP1Q8IX19 187 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 CCDC36Q8IYA8 594 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 SAXO1Q8IYX7 474 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 MUC20Q8N307 709 aaPredicted RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 ARRDC1Q8N5I2 433 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 GVQW1Q8N7I0 195 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 CSNK2A3Q8NEV1 391 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 TMEM185AQ8NFB2 350 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 OR51T1Q8NGJ9 327 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 OR8S1Q8NH09 359 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 TERB2Q8NHR7 220 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 TNFAIP8L1Q8WVP5 186 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 BCL2L2Q92843 193 aaPredicted RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 APOBEC3DQ96AK3 386 aaPredicted RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 APH1AQ96BI3 265 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 CMBLQ96DG6 245 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 GMPPAQ96IJ6 420 aaPredicted RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 POM121L2Q96KW2 1035 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 Q96M66 194 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF75AQ96N20 296 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 SCGB3A2Q96PL1 93 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 SPACA5Q96QH8 159 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 S100A13Q99584 98 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 NICN1Q9BSH3 213 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 PECRQ9BY49 303 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 PRRG4Q9BZD6 226 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 METTL9Q9H1A3 318 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 BANF2Q9H503 90 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 OPA3Q9H6K4 179 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 LDAHQ9H6V9 325 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 ZMAT3Q9HA38 289 aaKnown RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 CALHM2Q9HA72 323 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 BEX1Q9HBH7 125 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 DECR2Q9NUI1 292 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 SPRR3Q9UBC9 169 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 KCNN3Q9UGI6 736 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 GPR132Q9UNW8 380 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 HSPB11Q9Y547 144 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 INTS1Q8N201 2190 aaKnown RBP5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 CACNA1GO43497 2377 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 IGKV1-27A0A075B6S5 117 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 A0A0B4J2A0 478 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A10PA6NDY2 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A18PA6NE21 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A16PA6NEW6 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A20PA6NIJ5 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A8PA6NJQ4 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A7PA6NKC0 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 A6NL46 340 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF891A8MT65 544 aaPredicted RBP5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A22PA8MWA6 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A12PA8MX19 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A5PA8MXJ8 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A23PA8MXZ1 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 NPIPB6E9PJ23 425 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 SMLR1H3BR10 107 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 M0QYG6 137 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 AQP7O14520 342 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 RRP8O43159 456 aaKnown RBP5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 CD8AP01732 235 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 RLN1P04808 185 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 TPOP07202 933 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A15PP0C7V4 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A13PP0C7W8 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A14PP0C7W9 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM90A24PP0C7X0 464 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 C4BPBP20851 252 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 ZBTB25P24278 435 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 BLVRBP30043 206 aaPredicted RBP5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 AGTR1P30556 359 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 HRH1P35367 487 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 GNG2P59768 71 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 RAB1AP62820 205 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms