RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 C14orf166Q9Y224 244 aaKnown RBP11.27□□□□□ -0.61
SHMT2-205ENST00000553474 NUDT19A8MXV4 375 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 CSTBP04080 98 aaKnown RBP11.26□□□□□ -0.61
SHMT2-205ENST00000553474 TPT1P13693 172 aaKnown RBP11.26□□□□□ -0.61
SHMT2-205ENST00000553474 CNR1P21554 472 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 CYB561P49447 251 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 RBP2P50120 134 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 NPY4RP50391 375 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 MTCP1P56278 107 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 ZNF468Q5VIY5 522 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-205ENST00000553474 C1QL2Q7Z5L3 287 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 OR13G1Q8NGZ3 307 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 TMEM45BQ96B21 275 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 PIK3IP1Q96FE7 263 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 LIN37Q96GY3 246 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-205ENST00000553474 REEP6Q96HR9 211 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 LINC00052Q96N35 136 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 PIGMQ9H3S5 423 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 CRLF2Q9HC73 371 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 BOKQ9UMX3 212 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-205ENST00000553474 POM121CA8CG34 1229 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 EEF1E1-BLOC1S5C9J1V9 151 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 F5H0A9 414 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-205ENST00000553474 CYTIPO60759 359 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 SERPINA5P05154 406 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 HOXD4P09016 255 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-205ENST00000553474 TCN2P20062 427 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 PMELP40967 661 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 EIF5AP63241 154 aaKnown RBP11.26□□□□□ -0.61
SHMT2-205ENST00000553474 SUPT4H1P63272 117 aaKnown RBP11.26□□□□□ -0.61
SHMT2-205ENST00000553474 TUSC1Q2TAM9 212 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 SNAI3Q3KNW1 292 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 PRSS54Q6PEW0 395 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 SLC30A7Q8NEW0 376 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 OR5D18Q8NGL1 313 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 C2orf50Q96LR7 162 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 TAAR9Q96RI9 348 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 FOXB1Q99853 325 aa11.26□□□□□ -0.61
SHMT2-205ENST00000553474 BARX1Q9HBU1 254 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-205ENST00000553474 KNTC1P50748 2209 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 SDK2Q58EX2 2172 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 RAB19A4D1S5 217 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 C5orf63A6NC05 138 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 LRRC3CA6NJW4 275 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 G3V3Y1 287 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 TEX46H3BTG2 121 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 XRCC2O43543 280 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 FARS2O95363 451 aaKnown RBP11.25□□□□□ -0.61
SHMT2-205ENST00000553474 DBHP09172 617 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 RSU1Q15404 277 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 CDCP2Q5VXM1 449 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 RPUSD3Q6P087 351 aaKnown RBP11.25□□□□□ -0.61
SHMT2-205ENST00000553474 YRDCQ86U90 279 aaKnown RBP11.25□□□□□ -0.61
SHMT2-205ENST00000553474 OR10D3Q8NH80 312 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 DCUN1D4Q92564 292 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 BORCS8Q96FH0 119 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 WDR13Q9H1Z4 485 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 ELL3Q9HB65 397 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-205ENST00000553474 C1orf123Q9NWV4 160 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 CSAG2Q9Y5P2 127 aa11.25□□□□□ -0.61
SHMT2-205ENST00000553474 CCDC187A0A096LP49 1063 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 C13orf42A0A1B0GVH6 325 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 PMS2P1A4D2B8 440 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 TAAR5O14804 337 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 IFNA2P01563 188 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-205ENST00000553474 TMEM225BP0DP42 221 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 RPS2P15880 293 aaKnown RBP11.24□□□□□ -0.61
SHMT2-205ENST00000553474 ZNF32P17041 273 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 OTX2P32243 289 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 FUT6P51993 359 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 GFRA1P56159 465 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 Q0VFX4 171 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 RTN4RL2Q86UN3 420 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 ZSCAN4Q8NAM6 433 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-205ENST00000553474 NPRL2Q8WTW4 380 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 PIGTQ969N2 578 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 ZNF837Q96EG3 531 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-205ENST00000553474 LINC00470Q9BZP3 86 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 OR2H1Q9GZK4 316 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 LDAHQ9H6V9 325 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 DLL3Q9NYJ7 618 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 ANXA10Q9UJ72 324 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 LOXL2Q9Y4K0 774 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 NCKAP5O14513 1909 aa11.24□□□□□ -0.61
SHMT2-205ENST00000553474 IGKV3D-15A0A087WSY6 115 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 PRSS44E7EML9 344 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 CDK2AP1O14519 115 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 FGF16O43320 207 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 CXCL13O43927 109 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 NRASP01111 189 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 LCATP04180 440 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 PGAM2P15259 253 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 ACKR3P25106 362 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 HTR5AP47898 357 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 PPIAP62937 165 aaKnown RBP11.23□□□□□ -0.61
SHMT2-205ENST00000553474 IL15RAQ13261 267 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 OR8B8Q15620 311 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 ZNF774Q6NX45 483 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms