RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 DUS4LO95620 317 aaKnown RBP7.27□□□□□ -1.25
SYNE2-209ENST00000553308 IFNGP01579 166 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 TK1P04183 234 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 LYNP07948 512 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 ZNF3P17036 446 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 DYNLT3P51808 116 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 SLC34A1Q06495 639 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 PPP1R8Q12972 351 aaKnown RBP7.27□□□□□ -1.25
SYNE2-209ENST00000553308 DYNC1I2Q13409 638 aaKnown RBP7.27□□□□□ -1.25
SYNE2-209ENST00000553308 KHDC1LQ5JSQ8 128 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 PLCXD3Q63HM9 321 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 MOB3CQ70IA8 216 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 HDXQ7Z353 690 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-209ENST00000553308 IQCF1Q8N6M8 205 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 LINC00482Q8N8I6 264 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 AQP11Q8NBQ7 271 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 OR2T33Q8NG76 320 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 OR11H6Q8NGC7 330 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 OR13D1Q8NGV5 346 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 OTOSQ8NHW6 89 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 THEM6Q8WUY1 208 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 OTULINQ96BN8 352 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 OR8B4Q96RC9 309 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 CMC2Q9NRP2 79 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 OR14J1Q9UGF5 321 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 MAGEL2Q9UJ55 1249 aa7.27□□□□□ -1.25
SYNE2-209ENST00000553308 TSSC4Q9Y5U2 329 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-209ENST00000553308 J3QT63 122 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 CCDC22O60826 627 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 KRT36O76013 467 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 CCNB2O95067 398 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 NXPH2O95156 264 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 CCDC159P0C7I6 412 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 PGA5P0DJD9 388 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 ZNF728P0DKX0 622 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 IGHV1-8P0DP01 117 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 AZGP1P25311 298 aaKnown RBP7.26□□□□□ -1.25
SYNE2-209ENST00000553308 MAP2K3P46734 347 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 HMGA2P52926 109 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 OR12D2P58182 307 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 SAMD4BQ5PRF9 694 aaKnown RBP7.26□□□□□ -1.25
SYNE2-209ENST00000553308 LCN8Q6JVE9 175 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 KRT74Q7RTS7 529 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 TCF23Q7RTU1 214 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 TRPM8Q7Z2W7 1104 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 CENPVQ7Z7K6 275 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-209ENST00000553308 COMMD2Q86X83 199 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 CALHM1Q8IU99 346 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 OR4X2Q8NGF9 303 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 OR5A2Q8NGI9 324 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 NSMCE2Q96MF7 247 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 OR51V1Q9H2C8 321 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 NIPAL2Q9H841 368 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 VIPAS39Q9H9C1 493 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 VNN3Q9NY84 501 aa7.26□□□□□ -1.25
SYNE2-209ENST00000553308 SH2D7A6NKC9 451 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-209ENST00000553308 FAM90A22PA8MWA6 464 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 SASH3O75995 380 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 CLIC3O95833 236 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 RBP4P02753 201 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 LPLP06858 475 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 CHRM2P08172 466 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 HSD17B1P14061 328 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 CD24P25063 80 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 HAAOP46952 286 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 EDDM3BP56851 147 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 ACTA2P62736 377 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 ACTG2P63267 376 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 ACTC1P68032 377 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 ACTA1P68133 377 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 COL10A1Q03692 680 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 ETV3LQ6ZN32 361 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 RNF144BQ7Z419 303 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 MRPL41Q8IXM3 137 aaKnown RBP7.25□□□□□ -1.25
SYNE2-209ENST00000553308 ZNF454Q8N9F8 522 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 ASCC1Q8N9N2 400 aaKnown RBP7.25□□□□□ -1.25
SYNE2-209ENST00000553308 NDNFQ8TB73 568 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 DPF1Q92782 380 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 NRIP2Q9BQI9 281 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 CHID1Q9BWS9 393 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 HES4Q9HCC6 221 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 FAM206AQ9NX38 181 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 PIGLQ9Y2B2 252 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 TENM3Q9P273 2699 aa7.25□□□□□ -1.25
SYNE2-209ENST00000553308 IGHV2-26A0A0B4J1V2 119 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 A0A0U1RQV5 110 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 K7N7A8 449 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 PSMD9O00233 223 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 NOS1APO75052 506 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-209ENST00000553308 ZNF737O75373 536 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 NRASP01111 189 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 IGLV3-1P01715 115 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 HCCSP53701 268 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 RIPPLY1Q0D2K3 151 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 ABCA11PQ4W5N1 156 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 ZNF684Q5T5D7 378 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 MINOS1Q5TGZ0 78 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 PLBD1Q6P4A8 553 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 KRT77Q7Z794 578 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms