RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 RPL14P50914 215 aaKnown RBP3.95□□□□□ -1.78
SCFD1-208ENST00000553278 PMVKQ15126 192 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 SNRNP35Q16560 246 aaKnown RBP3.95□□□□□ -1.78
SCFD1-208ENST00000553278 CEACAM16Q2WEN9 425 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 MPV17L2Q567V2 206 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 CLEC19AQ6UXS0 136 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 LYG1Q8N1E2 194 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 ZCCHC24Q8N2G6 241 aaKnown RBP3.95□□□□□ -1.78
SCFD1-208ENST00000553278 LINC00612Q8N6U2 182 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 Q8N976 141 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 ZNF565Q8N9K5 539 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 ACTL9Q8TC94 416 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 C15orf40Q8WUR7 153 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 QKIQ96PU8 341 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCFD1-208ENST00000553278 RBM22Q9NW64 420 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCFD1-208ENST00000553278 ENPP4Q9Y6X5 453 aa3.95□□□□□ -1.78
SCFD1-208ENST00000553278 IGHV1OR15-9A0A0B4J2B8 117 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 J3QLI3 93 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 CHST10O43529 356 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 CCDC22O60826 627 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 MPZL1O95297 269 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 IGKV3-15P01624 115 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 RLN2P04090 185 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 PRSS3P35030 304 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 CCR6P51684 374 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 BAXQ07812 192 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 ADIGQ0VDE8 80 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 ITGB3BPQ13352 177 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-208ENST00000553278 SHHQ15465 462 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 MPPED2Q15777 294 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 SMUG1Q53HV7 270 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 FAM78AQ5JUQ0 283 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 TMEM205Q6UW68 189 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 DRAM1Q8N682 238 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 OR52P1PQ8NH57 321 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 DDIT4LQ96D03 193 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 OR10C1Q96KK4 312 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 SDHAF3Q9NRP4 125 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 PLEKHJ1Q9NW61 149 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 COMMD9Q9P000 198 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 PSG11Q9UQ72 335 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 TMEM131Q92545 1883 aa3.94□□□□□ -1.78
SCFD1-208ENST00000553278 IGHV6-1A0A0B4J1U7 121 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 FTCDNL1E5RQL4 147 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 UPK2O00526 184 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 SLC31A1O15431 190 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 ANGPTL7O43827 346 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 UGT2B11O75310 529 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 PSIP1O75475 530 aaKnown RBP3.93□□□□□ -1.78
SCFD1-208ENST00000553278 SRSF10O75494 262 aaKnown RBP3.93□□□□□ -1.78
SCFD1-208ENST00000553278 YIF1AO95070 293 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 OCM2P0CE71 109 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 RPS10P46783 165 aaKnown RBP3.93□□□□□ -1.78
SCFD1-208ENST00000553278 GCLMP48507 274 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 SLC18A1P54219 525 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 BNIP2Q12982 314 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 ZNF79Q15937 498 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 FBXL19-AS1Q494R0 122 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 WDFY1Q8IWB7 410 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 C11orf53Q8IXP5 236 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 OR4K2Q8NGD2 314 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 C22orf15Q8WYQ4 148 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 HGDQ93099 445 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 ELSPBP1Q96BH3 223 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 CMTM5Q96DZ9 223 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 SMIM8Q96KF7 97 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 TMEM56Q96MV1 263 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 BIRC8Q96P09 236 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 GGTLC1Q9BX51 225 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 POTEKPQ9BYX7 375 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 API5Q9BZZ5 524 aaKnown RBP3.93□□□□□ -1.78
SCFD1-208ENST00000553278 OR52D1Q9H346 318 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 DHX35Q9H5Z1 703 aaKnown RBP3.93□□□□□ -1.78
SCFD1-208ENST00000553278 TAS2R13Q9NYV9 303 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 KIF25-AS1Q9Y6Z4 181 aa3.93□□□□□ -1.78
SCFD1-208ENST00000553278 A0A0U1RQV1 116 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 A0A1W2PP18 115 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 RBFOX3A6NFN3 312 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 OR2AT4A6NND4 320 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 SYNGR1O43759 233 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 EIF1BO60739 113 aaKnown RBP3.92□□□□□ -1.78
SCFD1-208ENST00000553278 DEXIO95424 95 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 PSMG1O95456 288 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 CDK1P06493 297 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 TLX1NBP0CAT3 122 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 TAC1P20366 129 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 HLA-DMAP28067 261 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 EIF1P41567 113 aaKnown RBP3.92□□□□□ -1.78
SCFD1-208ENST00000553278 DLX6P56179 175 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 MAGOHP61326 146 aaKnown RBP3.92□□□□□ -1.78
SCFD1-208ENST00000553278 RPL10AP62906 217 aaKnown RBP3.92□□□□□ -1.78
SCFD1-208ENST00000553278 ATP6AP1LQ52LC2 224 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 KHDRBS2Q5VWX1 349 aaKnown RBP3.92□□□□□ -1.78
SCFD1-208ENST00000553278 LAMTOR1Q6IAA8 161 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 FAM45BPQ6NSW5 357 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 MED27Q6P2C8 311 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 TMEM251Q8N6I4 163 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 OR4M2Q8NGB6 313 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 OR5L1Q8NGL2 311 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms