RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ARMCX4Q5H9R4 360 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 OGFRL1Q5TC84 451 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-227ENST00000553256 LAIR2Q6ISS4 152 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 CRIP3Q6Q6R5 217 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-227ENST00000553256 OR10AC1Q8NH08 325 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 ZNF418Q8TF45 676 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-227ENST00000553256 STMN2Q93045 179 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 ADAT3Q96EY9 351 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-227ENST00000553256 C4orf36Q96KX1 117 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 ZNF488Q96MN9 340 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 Q96MT0 163 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 SUCNR1Q9BXA5 334 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 FGF20Q9NP95 211 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-227ENST00000553256 C8orf4Q9NR00 106 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 RASL12Q9NYN1 266 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 A0A1B0GVI7 797 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 SNTNA6NMZ2 147 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 OR2AT4A6NND4 320 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 E9PI62 339 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 GPR37O15354 613 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 RGS9O75916 674 aaPredicted RBP15.9■□□□□ 0.14
PTCH1-227ENST00000553256 GLRA1P23415 457 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 HAAOP46952 286 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 ACP7Q6ZNF0 438 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 SLC36A1Q7Z2H8 476 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 FAM220AQ7Z4H9 259 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 LHFPL3Q86UP9 236 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 ZNF573Q86YE8 665 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 CD177Q8N6Q3 437 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 SIGLECL1Q8N7X8 197 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 OR51A4Q8NGJ6 313 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 ZNF671Q8TAW3 534 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 DCTN5Q9BTE1 182 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 ALG8Q9BVK2 526 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 PKIBQ9C010 78 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 INPP5EQ9NRR6 644 aa15.9■□□□□ 0.14
PTCH1-227ENST00000553256 TRAV40A0A0B4J280 105 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 H3BSH0 61 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 GMFBP60983 142 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 IL24Q13007 206 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 LRRC36Q1X8D7 754 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 TMEM244Q5VVB8 128 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 ANGPTL5Q86XS5 388 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 RPS4Y2Q8TD47 263 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 FAM216AQ8WUB2 273 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 FBLIM1Q8WUP2 373 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 WDFY2Q96P53 400 aa15.89■□□□□ 0.13
PTCH1-227ENST00000553256 RPL36Q9Y3U8 105 aaKnown RBP15.89■□□□□ 0.13
PTCH1-227ENST00000553256 IGHV3OR16-10A0A075B7F0 116 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 CENPVL3A0A0U1RRI6 287 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 F8VVB4 439 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 F8VWA3 439 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 J3QLW9 94 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 FADS2O95864 444 aaKnown RBP15.88■□□□□ 0.13
PTCH1-227ENST00000553256 ZNF19P17023 458 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 FPR2P25090 351 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 CAV3P56539 151 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 ACTA2P62736 377 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 ACTG2P63267 376 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 ALKBH1Q13686 389 aaKnown RBP15.88■□□□□ 0.13
PTCH1-227ENST00000553256 UTS2BQ765I0 119 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 BPIFB2Q8N4F0 458 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 Q8N7P7 452 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 PNLDC1Q8NA58 520 aaKnown RBP15.88■□□□□ 0.13
PTCH1-227ENST00000553256 CNIH3Q8TBE1 160 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 ST8SIA4Q92187 359 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 TNFRSF14Q92956 283 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 CNTD2Q9H8S5 307 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 MTCH1Q9NZJ7 389 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 DNAJB11Q9UBS4 358 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 KPTNQ9Y664 436 aa15.88■□□□□ 0.13
PTCH1-227ENST00000553256 UBA52P62987 128 aaKnown RBP15.87■□□□□ 0.13
PTCH1-227ENST00000553256 IL13RA1P78552 427 aa15.87■□□□□ 0.13
PTCH1-227ENST00000553256 IKZF1Q13422 519 aa15.87■□□□□ 0.13
PTCH1-227ENST00000553256 RNF144BQ7Z419 303 aa15.87■□□□□ 0.13
PTCH1-227ENST00000553256 ZNF485Q8NCK3 441 aa15.87■□□□□ 0.13
PTCH1-227ENST00000553256 DNAAF1Q8NEP3 725 aa15.87■□□□□ 0.13
PTCH1-227ENST00000553256 PP6455Q8WZ26 134 aa15.87■□□□□ 0.13
PTCH1-227ENST00000553256 TMIGD2Q96BF3 282 aa15.87■□□□□ 0.13
PTCH1-227ENST00000553256 MED30Q96HR3 178 aa15.87■□□□□ 0.13
PTCH1-227ENST00000553256 FBN3Q75N90 2809 aa15.87■□□□□ 0.13
PTCH1-227ENST00000553256 CLDN34H7C241 214 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 NDUFB3O43676 98 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 ZFPL1O95159 310 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 HTR1AP08908 422 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 COMPP49747 757 aaPredicted RBP15.86■□□□□ 0.13
PTCH1-227ENST00000553256 FUT6P51993 359 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 BPIFB3P59826 476 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 ARF6P62330 175 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 TTC23Q5W5X9 447 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 ASPHD2Q6ICH7 369 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 KIR3DL3Q8N743 410 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 ZNRF1Q8ND25 227 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 ZNF555Q8NEP9 628 aa15.86■□□□□ 0.13
PTCH1-227ENST00000553256 RGP1Q92546 391 aaPredicted RBP15.86■□□□□ 0.13
PTCH1-227ENST00000553256 SLC25A10Q9UBX3 287 aaPredicted RBP15.86■□□□□ 0.13
PTCH1-227ENST00000553256 NKX1-2Q9UD57 310 aaPredicted RBP15.86■□□□□ 0.13
PTCH1-227ENST00000553256 RFPL4AA6NLU0 287 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 RFPL4AL1F8VTS6 287 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms