RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 MINOS1Q5TGZ0 78 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 KCTD18Q6PI47 426 aaPredicted RBP10.22□□□□□ -0.77
VPS29-211ENST00000553128 HAGHLQ6PII5 290 aaPredicted RBP10.22□□□□□ -0.77
VPS29-211ENST00000553128 FTMTQ8N4E7 242 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 FAM86B1Q8N7N1 296 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 SLC37A3Q8NCC5 494 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 KLHL30-AS1Q8NEE0 82 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 OR2T4Q8NH00 348 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 RNF133Q8WVZ7 376 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 RAX2Q96IS3 184 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 OR8B4Q96RC9 309 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 KRCC1Q9NPI7 259 aaPredicted RBP10.22□□□□□ -0.77
VPS29-211ENST00000553128 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.22□□□□□ -0.77
VPS29-211ENST00000553128 ZMAT5Q9UDW3 170 aaKnown RBP10.22□□□□□ -0.77
VPS29-211ENST00000553128 SCOCQ9UIL1 159 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 RAB21Q9UL25 225 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 MINOS1-NBL1R4GNA1 71 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 IGHV2-26A0A0B4J1V2 119 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 NUDT19A8MXV4 375 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 PGA5P0DJD9 388 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 FMO3P31513 532 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 GNG3P63215 75 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 KLF10Q13118 480 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 TEX30Q5JUR7 227 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 BAIAP2L2Q6UXY1 529 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 C16orf82Q7Z2V1 217 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 SLC15A3Q8IY34 581 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 POC1AQ8NBT0 407 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 OR4P4Q8NGL7 312 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 ZNF671Q8TAW3 534 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 NOL4LQ96MY1 436 aaPredicted RBP10.21□□□□□ -0.77
VPS29-211ENST00000553128 ABHD6Q9BV23 337 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 ABCB9Q9NP78 766 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 RASL12Q9NYN1 266 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 OR14J1Q9UGF5 321 aa10.21□□□□□ -0.77
VPS29-211ENST00000553128 FAM32AQ9Y421 112 aaKnown RBP10.21□□□□□ -0.77
VPS29-211ENST00000553128 BBIP1A8MTZ0 92 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 NME4O00746 187 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 GSTA4O15217 222 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 MMP23AO75900 390 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 OR2F2O95006 317 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 SPI1P17947 270 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 OPRL1P41146 370 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 GSSP48637 474 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 CRMP1Q14194 572 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 SNCBQ16143 134 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 DEFB136Q30KP8 78 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 SMIM21Q3B7S5 101 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 CEACAM21Q3KPI0 293 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 PIGWQ7Z7B1 504 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 OR8D4Q8NGM9 314 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 OR6K6Q8NGW6 343 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 RBM14Q96PK6 669 aaKnown RBP10.2□□□□□ -0.78
VPS29-211ENST00000553128 HIST1H2AAQ96QV6 131 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 NMNAT2Q9BZQ4 307 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 RGCCQ9H4X1 137 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 GID8Q9NWU2 228 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 CD300AQ9UGN4 299 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 LINC00527Q9UJ94 153 aa10.2□□□□□ -0.78
VPS29-211ENST00000553128 RBP4P02753 201 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 OR3A4PP47883 348 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 EDDM3BP56851 147 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 LINC01590Q5TEZ4 76 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 METTL21CQ5VZV1 264 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 OVCH2Q7RTZ1 564 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 EGFL6Q8IUX8 553 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 OR8B12Q8NGG6 310 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 CAPSLQ8WWF8 208 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 STMN2Q93045 179 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 FAM162AQ96A26 154 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 RCN3Q96D15 328 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 AKR1E2Q96JD6 320 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 ZNF714Q96N38 554 aa10.19□□□□□ -0.78
VPS29-211ENST00000553128 K7N7A8 449 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 CCL24O00175 119 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 SF3A3Q12874 501 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPS29-211ENST00000553128 MOB3CQ70IA8 216 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 ERI1Q8IV48 349 aaKnown RBP10.18□□□□□ -0.78
VPS29-211ENST00000553128 ZNF695Q8IW36 515 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 ZNF676Q8N7Q3 588 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 TPRX1Q8N7U7 411 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 ASCC1Q8N9N2 400 aaKnown RBP10.18□□□□□ -0.78
VPS29-211ENST00000553128 OR6N2Q8NGY6 317 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 DYDC1Q8WWB3 177 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 TAS2R1Q9NYW7 299 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 NKX1-2Q9UD57 310 aaPredicted RBP10.18□□□□□ -0.78
VPS29-211ENST00000553128 HHLA2Q9UM44 414 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 SESN1Q9Y6P5 492 aa10.18□□□□□ -0.78
VPS29-211ENST00000553128 RYR1P21817 5038 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 H3BUI4 141 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 ZNF737O75373 536 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 NXPH2O95156 264 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 GADD45GO95257 159 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 APOC1P02654 83 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 H2BFMP0C1H6 154 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 HTR1DP28221 377 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 TSPAN31Q12999 210 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 C9orf66Q5T8R8 295 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 LCNL1Q6ZST4 164 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 KRT74Q7RTS7 529 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms