RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-222	ENST00000552465	MED20	Q9H944	212 aa		13.54	□□□□□ -0.24
CACNB3-222	ENST00000552465	VIPAS39	Q9H9C1	493 aa		13.54	□□□□□ -0.24
CACNB3-222	ENST00000552465	LYVE1	Q9Y5Y7	322 aa		13.54	□□□□□ -0.24
CACNB3-222	ENST00000552465	OR5B21	A6NL26	309 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	RIIAD1	A6NNX1	92 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	FAM90A22P	A8MWA6	464 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	TNFRSF11B	O00300	401 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	TK1	P04183	234 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	PIP	P12273	146 aa	Predicted RBP	13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	ZNF3	P17036	446 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	OR12D2	P58182	307 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	SAMD4B	Q5PRF9	694 aa	Known RBP	13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	LCN8	Q6JVE9	175 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	MOB3C	Q70IA8	216 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	THEM6	Q8WUY1	208 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	ARMC1	Q9NVT9	282 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	MAGEL2	Q9UJ55	1249 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	HILPDA	Q9Y5L2	63 aa		13.53	□□□□□ -0.24
CACNB3-222	ENST00000552465	FAM183A	A6NL82	134 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465		H3BUI4	141 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	SOX14	O95416	240 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	CLIC3	O95833	236 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	LYN	P07948	512 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	ZNF728	P0DKX0	622 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	AZGP1	P25311	298 aa	Known RBP	13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	PSMA6	P60900	246 aa	Known RBP	13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	DYNC1I2	Q13409	638 aa	Known RBP	13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	ZNF454	Q8N9F8	522 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	AQP11	Q8NBQ7	271 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	OTOS	Q8NHW6	89 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	ITFG2	Q969R8	447 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	OR8B4	Q96RC9	309 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	CMC2	Q9NRP2	79 aa		13.52	□□□□□ -0.25
CACNB3-222	ENST00000552465	NOS1AP	O75052	506 aa	Predicted RBP	13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	CCNB2	O95067	398 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	RBP4	P02753	201 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	PGA5	P0DJD9	388 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	IGHV1-8	P0DP01	117 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	SLC34A1	Q06495	639 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	MINOS1	Q5TGZ0	78 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	LINC00482	Q8N8I6	264 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	DPF1	Q92782	380 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	OTULIN	Q96BN8	352 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	NSMCE2	Q96MF7	247 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	GPR61	Q9BZJ8	451 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	NIPAL2	Q9H841	368 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	MINOS1-NBL1	R4GNA1	71 aa		13.51	□□□□□ -0.25
CACNB3-222	ENST00000552465	DNAH9	Q9NYC9	4486 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	MEX3A	A1L020	520 aa	Known RBP	13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465		K7N7A8	449 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	SELENOF	O60613	162 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	HSD17B1	P14061	328 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	RIPPLY1	Q0D2K3	151 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	DCTN2	Q13561	401 aa	Known RBP	13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	PLCXD3	Q63HM9	321 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	TRPM8	Q7Z2W7	1104 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	OR4X2	Q8NGF9	303 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	CMTM5	Q96DZ9	223 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	NRIP2	Q9BQI9	281 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	OR51V1	Q9H2C8	321 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	OR14J1	Q9UGF5	321 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465	KLHDC2	Q9Y2U9	406 aa		13.5	□□□□□ -0.25
CACNB3-222	ENST00000552465		A0A0U1RQV5	110 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	ARPC2	O15144	300 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	NXPH2	O95156	264 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	NHLRC4	P0CG21	123 aa	Predicted RBP	13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	ATP6V1B1	P15313	513 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	HAAO	P46952	286 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	COL10A1	Q03692	680 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	C10orf99	Q6UWK7	81 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	C16orf82	Q7Z2V1	217 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	RNF144B	Q7Z419	303 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	ZNF573	Q86YE8	665 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	CHID1	Q9BWS9	393 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	HES4	Q9HCC6	221 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	TAS2R1	Q9NYW7	299 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465		U3KQK5	164 aa		13.49	□□□□□ -0.25
CACNB3-222	ENST00000552465	ACOD1	A6NK06	481 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465		J3QT63	122 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	GSC2	O15499	205 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	NRAS	P01111	189 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	LPL	P06858	475 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	ACTA2	P62736	377 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	ACTG2	P63267	376 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	ACTC1	P68032	377 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	ACTA1	P68133	377 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	PPP1R8	Q12972	351 aa	Known RBP	13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	KHDC1L	Q5JSQ8	128 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	PIGW	Q7Z7B1	504 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	MRPL41	Q8IXM3	137 aa	Known RBP	13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	BATF2	Q8N1L9	274 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	NDNF	Q8TB73	568 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	AKR1E2	Q96JD6	320 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	DGCR6L	Q9BY27	220 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	LIN7B	Q9HAP6	207 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	FAM206A	Q9NX38	181 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	ENPP5	Q9UJA9	477 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	PIGL	Q9Y2B2	252 aa		13.48	□□□□□ -0.25
CACNB3-222	ENST00000552465	POLDIP2	Q9Y2S7	368 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms