RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TXNDC12O95881 172 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 IGF2P01344 180 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 IGHMP01871 453 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ASAH2BP0C7U1 165 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 GKN3PP0CG01 181 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 PGA4P0DJD7 388 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 PGA3P0DJD8 388 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 GPX2P18283 190 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 PRPS1L1P21108 318 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 KITLGP21583 273 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ME2P23368 584 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 GLRA1P23415 457 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 NTSP30990 170 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 MAGEA8P43361 318 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ATP4BP51164 291 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 POLR2HP52434 150 aaKnown RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 SH3BGRP55822 239 aaPredicted RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 FXYD6P3P58550 94 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 NAA20P61599 178 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 GNG11P61952 73 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 SNRPD2P62316 118 aaKnown RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 RPL38P63173 70 aaKnown RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 HIST1H3AP68431 136 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 CCL8P80075 99 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TGFBR3Q03167 851 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 COX10Q12887 443 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 PSG7Q13046 419 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 MAB21L1Q13394 359 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ENDOGQ14249 297 aaKnown RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 OR7A5Q15622 319 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 CHI3L2Q15782 390 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TAF9Q16594 264 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 DEFB112Q30KQ8 113 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM155Q4W5P6 130 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 CLEC12AQ5QGZ9 265 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 LDLRAD2Q5SZI1 272 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 C10orf128Q5T292 105 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 OTUD3Q5T2D3 398 aaPredicted RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 HIST2H3PS2Q5TEC6 136 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TNFAIP8L2Q6P589 184 aaPredicted RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 UGT2A3Q6UWM9 527 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 CASP12Q6UXS9 341 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 Q6ZRG5 221 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 Q6ZRP5 223 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ZCCHC23Q6ZST2 131 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 HIST2H3AQ71DI3 136 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 NOTCH2NLQ7Z3S9 236 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 VRK2Q86Y07 508 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 C11orf53Q8IXP5 236 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 CCDC36Q8IYA8 594 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF100Q8IYN0 542 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ELMOD2Q8IZ81 293 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 Q8N2B8 174 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 NATD1Q8N6N6 113 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 C3orf56Q8N813 242 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 EIF1ADQ8N9N8 165 aaKnown RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 LY6G5BQ8NDX9 201 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 OR6X1Q8NH79 312 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TWIST2Q8WVJ9 160 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM234Q8WY98 164 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 C22orf15Q8WYQ4 148 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 GTF2H4Q92759 462 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 POP5Q969H6 163 aaKnown RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TMIGD2Q96BF3 282 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ANKRD27Q96NW4 1050 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 OXGR1Q96P68 337 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ZIM3Q96PE6 472 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 RAB40CQ96S21 281 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TBX15Q96SF7 602 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 EMC6Q9BV81 110 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM109Q9BVC6 243 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 CHIAQ9BZP6 476 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 RAB17Q9H0T7 212 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 RAB1BQ9H0U4 201 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 SIRPDQ9H106 197 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 FNDC4Q9H6D8 234 aaPredicted RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 SP140LQ9H930 580 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 NTN4Q9HB63 628 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 PATZ1Q9HBE1 687 aaKnown RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 SCRT2Q9NQ03 307 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 RRAGDQ9NQL2 400 aaPredicted RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM38BQ9NVV0 291 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 MED29Q9NX70 200 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 MRPL39Q9NYK5 338 aaKnown RBP1.87□□□□□ -2.11
CPSF6-207ENST00000551516 ACTR3BQ9P1U1 418 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 CTSZQ9UBR2 303 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 DCDC2Q9UHG0 476 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 LGALS13Q9UHV8 139 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 NUP50Q9UKX7 468 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 RASD1Q9Y272 281 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 WDR45Q9Y484 360 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 PPIAL4AQ9Y536 164 aa1.87□□□□□ -2.11
CPSF6-207ENST00000551516 A0A087X002 238 aa1.86□□□□□ -2.11
CPSF6-207ENST00000551516 IGHV1-69-2A0A0G2JMI3 117 aa1.86□□□□□ -2.11
CPSF6-207ENST00000551516 CENPVL3A0A0U1RRI6 287 aa1.86□□□□□ -2.11
CPSF6-207ENST00000551516 SH3PXD2BA1X283 911 aa1.86□□□□□ -2.11
CPSF6-207ENST00000551516 CLPSL1A2RUU4 121 aa1.86□□□□□ -2.11
CPSF6-207ENST00000551516 CEACAM18A8MTB9 384 aa1.86□□□□□ -2.11
CPSF6-207ENST00000551516 K7EIL1 84 aa1.86□□□□□ -2.11
CPSF6-207ENST00000551516 M0R233 179 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms