RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CPT2P23786 658 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 HOXD3P31249 432 aaPredicted RBP5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 DCTDP32321 178 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 GRK5P34947 590 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 UBE2E1P51965 193 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 KRTAP10-11P60412 298 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 MS4A2Q01362 244 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 MFGE8Q08431 387 aaPredicted RBP5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 ODF4Q2M2E3 257 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 LRRC75BQ2VPJ9 315 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 TMEM177Q53S58 311 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 UTF1Q5T230 341 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 HAGHLQ6PII5 290 aaPredicted RBP5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 ANGPTL5Q86XS5 388 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 DEFB107AQ8IZN7 70 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 CMTM4Q8IZR5 234 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 GALNT4Q8N4A0 578 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 TPRX1Q8N7U7 411 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 BEND2Q8NDZ0 799 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 OR4C13Q8NGP0 309 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 OR51E1Q8TCB6 317 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 NPRL2Q8WTW4 380 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 RNF133Q8WVZ7 376 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 CFHR4Q92496 578 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 MCUR1Q96AQ8 359 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 CLPTM1LQ96KA5 538 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 INTS14Q96SY0 518 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 MICU1Q9BPX6 476 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 RTL8AQ9BWD3 113 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 CDCA4Q9BXL8 241 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 SLC22A4Q9H015 551 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 TLNRD1Q9H1K6 362 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 OR10A2Q9H208 303 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 GORASP2Q9H8Y8 452 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 RNPEPL1Q9HAU8 725 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 IL1RAPQ9NPH3 570 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 GPR173Q9NS66 373 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 IL20Q9NYY1 176 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 IL36RNQ9UBH0 155 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 OR14J1Q9UGF5 321 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 ZNF222Q9UK12 451 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 HILPDAQ9Y5L2 63 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 WI2-2373I1.2A0A1W2PRP0 233 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 TCRBV5S2A0A599 114 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 ANXA2P2A6NMY6 339 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 RIIAD1A6NNX1 92 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 H3BN98 237 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 K7EIL1 84 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 SLC22A2O15244 555 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 CCDC22O60826 627 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 AMY2AP04746 511 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 CCDC159P0C7I6 412 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 SNU13P55769 128 aaKnown RBP5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 LOXL3P58215 753 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 SMIM11AP58511 58 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 GRB2P62993 217 aaKnown RBP5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 SSX2Q16385 188 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 TCTEX1D4Q5JR98 221 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 KPRPQ5T749 579 aaPredicted RBP5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 ATPAF1Q5TC12 328 aaPredicted RBP5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 RASSF6Q6ZTQ3 369 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 C18orf65Q6ZTR6 163 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 CCDC121Q6ZUS5 278 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 COMMD2Q86X83 199 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 CPOQ8IVL8 374 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 ZDHHC23Q8IYP9 409 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 SPERTQ8NA61 448 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 OR2T27Q8NH04 317 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 OR2T6Q8NHC8 308 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 C8orf46Q8TAG6 207 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 TRMT10AQ8TBZ6 339 aaKnown RBP5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 BCAS4Q8TDM0 211 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 LRTOMTQ8WZ04 291 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 OR51I2Q9H344 312 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 METTL8Q9H825 291 aaKnown RBP5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 GAR1Q9NY12 217 aaKnown RBP5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 GTF2A1LQ9UNN4 478 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 COPS3Q9UNS2 423 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 AP3M1Q9Y2T2 418 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 LRP12Q9Y561 859 aa5.51□□□□□ -1.53
PRPF40B-214ENST00000551320 ZNF561-AS1K7EIQ3 104 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 MMP23AO75900 390 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 GLCEO94923 617 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 ARG1P05089 322 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 HSD17B1P14061 328 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 DUSP1P28562 367 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 PRDX2P32119 198 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 IFNGR2P38484 337 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 DDOSTP39656 456 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 KIR2DS4P43632 304 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 SLC15A1P46059 708 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 SLC25A1P53007 311 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 RPL15P61313 204 aaKnown RBP5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 RPS7P62081 194 aaKnown RBP5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 RPL31P62899 125 aaKnown RBP5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 DYNC1I2Q13409 638 aaKnown RBP5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 EDDM3AQ14507 147 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 GINS1Q14691 196 aa5.5□□□□□ -1.53
PRPF40B-214ENST00000551320 MLANAQ16655 118 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms