RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 OPN1MWP04001 364 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 TFF1P04155 84 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 OPN1MW2P0DN77 364 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 OPN1MW3P0DN78 364 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 RAP2AP10114 183 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 PSG2P11465 335 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 HOXB6P17509 224 aaKnown RBP6.2□□□□□ -1.42
NEK3-201ENST00000550331 POU1F1P28069 291 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 GABRA2P47869 451 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 GPM6AP51674 278 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 EFNB2P52799 333 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 GINS1Q14691 196 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 BEAN1Q3B7T3 259 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 KPRPQ5T749 579 aaPredicted RBP6.2□□□□□ -1.42
NEK3-201ENST00000550331 KCTD18Q6PI47 426 aaPredicted RBP6.2□□□□□ -1.42
NEK3-201ENST00000550331 DEGS2Q6QHC5 323 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 TRPM8Q7Z2W7 1104 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 THAP5Q7Z6K1 395 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 FAM185AQ8N0U4 392 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 ZNRF1Q8ND25 227 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 TMEM185AQ8NFB2 350 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 OR5A2Q8NGI9 324 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 OR2T6Q8NHC8 308 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 FAM81AQ8TBF8 368 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 GIPC3Q8TF64 312 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 AQP3Q92482 292 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 CFHR4Q92496 578 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 ASB9Q96DX5 294 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 FAM206AQ9NX38 181 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 LAMP5Q9UJQ1 280 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 KLHDC2Q9Y2U9 406 aa6.2□□□□□ -1.42
NEK3-201ENST00000550331 BIRC6Q9NR09 4857 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 TMEM269A0A1B0GVZ9 245 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 hCG_1809904A0A1W2PP81 198 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 A0A1W2PPE2 198 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 A0A1W2PR64 198 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 A0A1W2PRV1 198 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 G3V4G9 280 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 ZNF254O75437 659 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 MTRF1O75570 445 aaKnown RBP6.19□□□□□ -1.42
NEK3-201ENST00000550331 CST1P01037 141 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 OSMP13725 252 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 ALOX5APP20292 161 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 SLC2A5P22732 501 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 CDK5Q00535 292 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 MS4A2Q01362 244 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 ROM1Q03395 351 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 RIPPLY1Q0D2K3 151 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 SMIM21Q3B7S5 101 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 CEP78Q5JTW2 689 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 LCN1P1Q5VSP4 162 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 HAGHLQ6PII5 290 aaPredicted RBP6.19□□□□□ -1.42
NEK3-201ENST00000550331 CRIP3Q6Q6R5 217 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 KRT77Q7Z794 578 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 CPOQ8IVL8 374 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 ZNF561Q8N587 486 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 POC1AQ8NBT0 407 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 PPP1R35Q8TAP8 253 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 C17orf50Q8WW18 174 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 AJUBAQ96IF1 538 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 CLPTM1LQ96KA5 538 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 LRGUKQ96M69 825 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 CHID1Q9BWS9 393 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 TEX12Q9BXU0 123 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 YIPF3Q9GZM5 350 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 NPFFR1Q9GZQ6 430 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 HEXA-AS1Q9H8Q6 139 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 ELL3Q9HB65 397 aaPredicted RBP6.19□□□□□ -1.42
NEK3-201ENST00000550331 C19orf12Q9NSK7 152 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 USE1Q9NZ43 259 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 NOTCH3Q9UM47 2321 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 DNAH9Q9NYC9 4486 aa6.19□□□□□ -1.42
NEK3-201ENST00000550331 RFPL4AA6NLU0 287 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 VGLL3A8MV65 326 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 RFPL4AL1F8VTS6 287 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 J3QT63 122 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 SLC1A7O00341 560 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 NOS1APO75052 506 aaPredicted RBP6.18□□□□□ -1.42
NEK3-201ENST00000550331 DHRS3O75911 302 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 PGA5P0DJD9 388 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 CALB2P22676 271 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 CAPZA1P52907 286 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 LGALS4P56470 323 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 ERVFRD-1P60508 538 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 RPS7P62081 194 aaKnown RBP6.18□□□□□ -1.42
NEK3-201ENST00000550331 RPL31P62899 125 aaKnown RBP6.18□□□□□ -1.42
NEK3-201ENST00000550331 GNGT1P63211 74 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 APOFQ13790 326 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 FAM189A2Q15884 450 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 LY6EQ16553 131 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 ZNF829Q3KNS6 432 aaPredicted RBP6.18□□□□□ -1.42
NEK3-201ENST00000550331 PLCXD3Q63HM9 321 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 ACP7Q6ZNF0 438 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 MOB3CQ70IA8 216 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 REC114Q7Z4M0 266 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 COMMD2Q86X83 199 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 ZNF573Q86YE8 665 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 CALHM1Q8IU99 346 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 MKXQ8IYA7 352 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 ZNF679Q8IYX0 411 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms