RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 RFPL4AA6NLU0 287 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 RFPL4AL1F8VTS6 287 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 H3BSH0 61 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 J3QT63 122 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 M0R1W7 72 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 NPFFO15130 113 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 SYNGR1O43759 233 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 GPR137BO60478 399 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 CIB2O75838 187 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 NDUFA7O95182 113 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 KRT8P05787 483 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 FBP1P09467 338 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 SRSF4Q08170 494 aaKnown RBP13.39□□□□□ -0.27
VPS29-207ENST00000549970 BLMHQ13867 455 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 SMIM21Q3B7S5 101 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 OLFML2AQ68BL7 652 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 TMEM42Q69YG0 159 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 ASRGL1Q7L266 308 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 ZNF573Q86YE8 665 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 FAM185AQ8N0U4 392 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 BATF2Q8N1L9 274 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 PNKDQ8N490 385 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 POC1AQ8NBT0 407 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 NPRL2Q8WTW4 380 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 TNFRSF14Q92956 283 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 SDSLQ96GA7 329 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 DPAGT1Q9H3H5 408 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 RASL12Q9NYN1 266 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 CAB39Q9Y376 341 aaPredicted RBP13.39□□□□□ -0.27
VPS29-207ENST00000549970 PKD1L1Q8TDX9 2849 aa13.39□□□□□ -0.27
VPS29-207ENST00000549970 A0A1W2PQL4 384 aaPredicted RBP13.38□□□□□ -0.27
VPS29-207ENST00000549970 MEIOCA2RUB1 952 aa13.38□□□□□ -0.27
VPS29-207ENST00000549970 DLGAP1O14490 977 aa13.38□□□□□ -0.27
VPS29-207ENST00000549970 PGA5P0DJD9 388 aa13.38□□□□□ -0.27
VPS29-207ENST00000549970 HTR1FP30939 366 aa13.38□□□□□ -0.27
VPS29-207ENST00000549970 C17orf107Q6ZR85 190 aa13.38□□□□□ -0.27
VPS29-207ENST00000549970 CD177Q8N6Q3 437 aa13.38□□□□□ -0.27
VPS29-207ENST00000549970 OR10H4Q8NGA5 316 aa13.38□□□□□ -0.27
VPS29-207ENST00000549970 WFDC12Q8WWY7 111 aa13.38□□□□□ -0.27
VPS29-207ENST00000549970 CENPNQ96H22 339 aaPredicted RBP13.38□□□□□ -0.27
VPS29-207ENST00000549970 GABARAPL3Q9BY60 117 aa13.38□□□□□ -0.27
VPS29-207ENST00000549970 METTL8Q9H825 291 aaKnown RBP13.38□□□□□ -0.27
VPS29-207ENST00000549970 ZNRD1Q9P1U0 126 aa13.38□□□□□ -0.27
VPS29-207ENST00000549970 TRBV23-1A0A0A0MS06 115 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 PQLC2LA1A4F0 135 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 CLPSL1A2RUU4 121 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 H0YAE9 185 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 NXPH2O95156 264 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 PAHP00439 452 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 OR2T7P0C7T2 308 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 SAA4P35542 130 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 ATP6V1E1P36543 226 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 CEBPDP49716 269 aaPredicted RBP13.37□□□□□ -0.27
VPS29-207ENST00000549970 RPL15P61313 204 aaKnown RBP13.37□□□□□ -0.27
VPS29-207ENST00000549970 TAF9Q16594 264 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 NCR3LG1Q68D85 454 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 C1orf122Q6ZSJ8 110 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 CATSPERDQ86XM0 798 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 OR8J1Q8NGP2 316 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 OR2T27Q8NH04 317 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 TRMT10AQ8TBZ6 339 aaKnown RBP13.37□□□□□ -0.27
VPS29-207ENST00000549970 OSBPL10Q9BXB5 764 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 PLEKHA1Q9HB21 404 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 C19orf12Q9NSK7 152 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 POLDIP2Q9Y2S7 368 aa13.37□□□□□ -0.27
VPS29-207ENST00000549970 BTBD17A6NE02 478 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 ANKRD61A6NGH8 418 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 METTL15A6NJ78 407 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 DHRS7CA6NNS2 312 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 SLC1A7O00341 560 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 SYT7O43581 403 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 CCL1P22362 96 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 PRDX2P32119 198 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 UBE2E1P51965 193 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 BRICD5Q6PL45 260 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 TREML4Q6UXN2 200 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 GDPGP1Q6ZNW5 385 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 Q6ZSR3 168 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 ANGPTL5Q86XS5 388 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 CALHM1Q8IU99 346 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 PYDC1Q8WXC3 89 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 RORBQ92753 470 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 EME1Q96AY2 570 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 RBM4BQ9BQ04 359 aaKnown RBP13.36□□□□□ -0.27
VPS29-207ENST00000549970 OR14J1Q9UGF5 321 aa13.36□□□□□ -0.27
VPS29-207ENST00000549970 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.36□□□□□ -0.27
VPS29-207ENST00000549970 FAM230AA0A1W2PPH8 454 aa13.35□□□□□ -0.27
VPS29-207ENST00000549970 ANGPTL7O43827 346 aa13.35□□□□□ -0.27
VPS29-207ENST00000549970 NOS1APO75052 506 aaPredicted RBP13.35□□□□□ -0.27
VPS29-207ENST00000549970 CDC42P60953 191 aa13.35□□□□□ -0.27
VPS29-207ENST00000549970 RPL31P62899 125 aaKnown RBP13.35□□□□□ -0.27
VPS29-207ENST00000549970 DHRS7BQ6IAN0 325 aaPredicted RBP13.35□□□□□ -0.27
VPS29-207ENST00000549970 ZNF561Q8N587 486 aa13.35□□□□□ -0.27
VPS29-207ENST00000549970 OR4M1Q8NGD0 313 aa13.35□□□□□ -0.27
VPS29-207ENST00000549970 OR5D13Q8NGL4 314 aa13.35□□□□□ -0.27
VPS29-207ENST00000549970 NRIP2Q9BQI9 281 aa13.35□□□□□ -0.27
VPS29-207ENST00000549970 ADI1Q9BV57 179 aa13.35□□□□□ -0.27
VPS29-207ENST00000549970 VPREB3Q9UKI3 123 aa13.35□□□□□ -0.27
VPS29-207ENST00000549970 SLC7A11Q9UPY5 501 aa13.35□□□□□ -0.27
VPS29-207ENST00000549970 RNF114Q9Y508 228 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms