RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 AVPI1Q5T686 147 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 PRSS57Q6UWY2 283 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 SLC25A26Q70HW3 274 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 GPR141Q7Z602 305 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 BATF2Q8N1L9 274 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 GCSAMQ8N6F7 178 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 C19orf18Q8NEA5 215 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 ZNF488Q96MN9 340 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 GPER1Q99527 375 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 PKIBQ9C010 78 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 SLITRK2Q9H156 845 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 RNF167Q9H6Y7 350 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 SNTG1Q9NSN8 517 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 TRIM64BA6NI03 449 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 AKR7A2O43488 359 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 SPRY1O43609 319 aaPredicted RBP17.82■□□□□ 0.44
VPS29-206ENST00000549578 GIFP27352 417 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 ZNF93P35789 620 aaPredicted RBP17.82■□□□□ 0.44
VPS29-206ENST00000549578 RPL5P46777 297 aaKnown RBP17.82■□□□□ 0.44
VPS29-206ENST00000549578 TMEM33P57088 247 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 DSCR9P59020 149 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 SHEQ5VZ18 495 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 C1orf87Q8N0U7 546 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 WFDC11Q8NEX6 87 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 PIMREGQ9BSJ6 248 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 CENPOQ9BU64 300 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 BPESC1Q9GZL8 116 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 POLDIP2Q9Y2S7 368 aa17.82■□□□□ 0.44
VPS29-206ENST00000549578 TEX15Q9BXT5 2789 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 ANGPTL7O43827 346 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 AIREO43918 545 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 CD80P33681 288 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 CFHR2P36980 270 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 GPR6P46095 362 aaPredicted RBP17.81■□□□□ 0.44
VPS29-206ENST00000549578 ZP1P60852 638 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 IL24Q13007 206 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 PDZK1IP1Q13113 114 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 TIMM50Q3ZCQ8 353 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 JAGN1Q8N5M9 183 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 ZNF671Q8TAW3 534 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 SLAMF9Q96A28 289 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 CPNE2Q96FN4 548 aaPredicted RBP17.81■□□□□ 0.44
VPS29-206ENST00000549578 Q96MF0 132 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 GSTK1Q9Y2Q3 226 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 WIPI2Q9Y4P8 454 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 NPTNQ9Y639 398 aa17.81■□□□□ 0.44
VPS29-206ENST00000549578 SRRM5B3KS81 715 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 NDUFS8O00217 210 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 WNT9BO14905 357 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 LHBP01229 141 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 MYL9P24844 172 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 OR3A4PP47883 348 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 LSM3P62310 102 aaKnown RBP17.8■□□□□ 0.44
VPS29-206ENST00000549578 SFRP4Q6FHJ7 346 aaPredicted RBP17.8■□□□□ 0.44
VPS29-206ENST00000549578 PEG10Q86TG7 708 aaKnown RBP17.8■□□□□ 0.44
VPS29-206ENST00000549578 NKAIN3Q8N8D7 197 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 OR10Z1Q8NGY1 313 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 SEH1LQ96EE3 360 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 GFI1Q99684 422 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 FAM192AQ9GZU8 254 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 NAA50Q9GZZ1 169 aaKnown RBP17.8■□□□□ 0.44
VPS29-206ENST00000549578 WDR13Q9H1Z4 485 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 MTCH1Q9NZJ7 389 aa17.8■□□□□ 0.44
VPS29-206ENST00000549578 AK6Q9Y3D8 172 aaKnown RBP17.8■□□□□ 0.44
VPS29-206ENST00000549578 IGKV1-12A0A0C4DH73 117 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 MEGF11A6BM72 1044 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 IGKV1D-12P01611 117 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 PGA5P0DJD9 388 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 TMEM225BP0DP42 221 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 TGFBR1P36897 503 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 BTG1P62324 171 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 ZMYND11Q15326 602 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 GPR107Q5VW38 600 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 POC1AQ8NBT0 407 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 TNFAIP8L1Q8WVP5 186 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 RAB1CQ92928 201 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 TIMD4Q96H15 378 aa17.79■□□□□ 0.44
VPS29-206ENST00000549578 TRAV1-2A0A0B4J238 106 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 ISPDA4D126 451 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 VWC2LB2RUY7 222 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.78■□□□□ 0.44
VPS29-206ENST00000549578 IGHV2-70P01814 119 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 NR4A2P43354 598 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 GDPGP1Q6ZNW5 385 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 C1QL2Q7Z5L3 287 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 LYPD6Q86Y78 171 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 MKXQ8IYA7 352 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 DEFB108BQ8NET1 73 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 OR51F2Q8NH61 342 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 KCTD7Q96MP8 289 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 NRIP2Q9BQI9 281 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 NARFLQ9H6Q4 476 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 CNTD2Q9H8S5 307 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 OTOGQ6ZRI0 2925 aa17.78■□□□□ 0.44
VPS29-206ENST00000549578 PPIAL4EA0A075B759 164 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 IGHV3OR15-7A0A075B7D8 119 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 SMIM30A4D0T7 59 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 PPIAL4DF5H284 164 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 F8VVB4 439 aa17.77■□□□□ 0.44
VPS29-206ENST00000549578 F8VWA3 439 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms