RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ACAA1P09110 424 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-210ENST00000548874 EGR1P18146 543 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 CALRP27797 417 aaKnown RBP17.72■□□□□ 0.43
CACNB3-210ENST00000548874 ZP1P60852 638 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 TIMM50Q3ZCQ8 353 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 GDPGP1Q6ZNW5 385 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 NKAIN3Q8N8D7 197 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 ZNF671Q8TAW3 534 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 RFT1Q96AA3 541 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 CHCHD6Q9BRQ6 235 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 PIMREGQ9BSJ6 248 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 BPESC1Q9GZL8 116 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 ITGB1BP2Q9UKP3 347 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 POLDIP2Q9Y2S7 368 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 WIPI2Q9Y4P8 454 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 NPTNQ9Y639 398 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 TRAV1-2A0A0B4J238 106 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 SHISA3A0PJX4 238 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-210ENST00000548874 PPIHO43447 177 aaKnown RBP17.71■□□□□ 0.43
CACNB3-210ENST00000548874 IGHV2-70P01814 119 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 PGA5P0DJD9 388 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 CD37P11049 281 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 ZNF93P35789 620 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-210ENST00000548874 GPR6P46095 362 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-210ENST00000548874 RPL5P46777 297 aaKnown RBP17.71■□□□□ 0.43
CACNB3-210ENST00000548874 POU3F4P49335 361 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 HOXA4Q00056 320 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-210ENST00000548874 PDZK1IP1Q13113 114 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 FAM201AQ5SY85 155 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 SLC25A26Q70HW3 274 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 POC1AQ8NBT0 407 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 WFDC11Q8NEX6 87 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 TIMD4Q96H15 378 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 Q96MF0 132 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 FUNDC2Q9BWH2 189 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 SLITRK2Q9H156 845 aa17.71■□□□□ 0.43
CACNB3-210ENST00000548874 AKR7A2O43488 359 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 PLATP00750 562 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 SLC25A16P16260 332 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 NR4A2P43354 598 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 ERVK11-1P61568 191 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 BTG1P62324 171 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 PEG10Q86TG7 708 aaKnown RBP17.7■□□□□ 0.42
CACNB3-210ENST00000548874 SATL1Q86VE3 508 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 SAXO1Q8IYX7 474 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 ZSCAN4Q8NAM6 433 aaPredicted RBP17.7■□□□□ 0.42
CACNB3-210ENST00000548874 OR5D18Q8NGL1 313 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 RAB1CQ92928 201 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 NRIP2Q9BQI9 281 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 CENPOQ9BU64 300 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 MTCH1Q9NZJ7 389 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 GSTK1Q9Y2Q3 226 aa17.7■□□□□ 0.42
CACNB3-210ENST00000548874 PPIAL4EA0A075B759 164 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 IGKV1-12A0A0C4DH73 117 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 PPIAL4DF5H284 164 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 SPRY1O43609 319 aaPredicted RBP17.69■□□□□ 0.42
CACNB3-210ENST00000548874 AIREO43918 545 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 IGKV1D-12P01611 117 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 PPIAL4FP0DN26 164 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 ZMYND11Q15326 602 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 AVPI1Q5T686 147 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 GPR141Q7Z602 305 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 MKXQ8IYA7 352 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 ZNF488Q96MN9 340 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 GPER1Q99527 375 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 GFI1Q99684 422 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 NKX3-1Q99801 234 aaPredicted RBP17.69■□□□□ 0.42
CACNB3-210ENST00000548874 PPIAL4AQ9Y536 164 aa17.69■□□□□ 0.42
CACNB3-210ENST00000548874 A0A096LNT2 108 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 LOC100506127A0A0U1RQW1 187 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 LGALS8O00214 317 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 WNT9BO14905 357 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 ANGPTL7O43827 346 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 MYL9P24844 172 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 CD80P33681 288 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 OR3A4PP47883 348 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 TEX36Q5VZQ5 186 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 ASCL4Q6XD76 172 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 LRRC28Q86X40 367 aaPredicted RBP17.68■□□□□ 0.42
CACNB3-210ENST00000548874 JAGN1Q8N5M9 183 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 PXT1Q8NFP0 134 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 OR51F2Q8NH61 342 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 TNFAIP8L1Q8WVP5 186 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 SLAMF9Q96A28 289 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 KCTD7Q96MP8 289 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 UQCC2Q9BRT2 126 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 WDR13Q9H1Z4 485 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 RNF167Q9H6Y7 350 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 HES4Q9HCC6 221 aa17.68■□□□□ 0.42
CACNB3-210ENST00000548874 MYO9AB2RTY4 2548 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 OOEPA6NGQ2 149 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 C3orf80F5H4A9 247 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 KDM4BO94953 1096 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 ZNF205O95201 554 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 CYB5AP00167 134 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 MDH2P40926 338 aaKnown RBP17.67■□□□□ 0.42
CACNB3-210ENST00000548874 PTGFRP43088 359 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 MTNR1BP49286 362 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 TMEM155Q4W5P6 130 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms