RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 RPL36Q9Y3U8 105 aaKnown RBP13.06□□□□□ -0.32
DDX54-205ENST00000548786 IGKV1D-17A0A075B6S4 117 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 DHRS7CA6NNS2 312 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 ZNF879B4DU55 563 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 TOX4O94842 621 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 NXPH2O95156 264 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 IGHA1P01876 353 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 PSG2P11465 335 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 ZNF20P17024 532 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 NDUFB7P17568 137 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 HILS1P60008 231 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 IL13RA1P78552 427 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 RAB40BQ12829 278 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 LRRC10Q5BKY1 277 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 RUSC1-AS1Q66K80 236 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 Q6ZSR3 168 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 KCTD20Q7Z5Y7 419 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 ZNF676Q8N7Q3 588 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 PNLDC1Q8NA58 520 aaKnown RBP13.05□□□□□ -0.32
DDX54-205ENST00000548786 POC1AQ8NBT0 407 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 TMEM185AQ8NFB2 350 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 FGGYQ96C11 551 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 MRPL48Q96GC5 212 aaKnown RBP13.05□□□□□ -0.32
DDX54-205ENST00000548786 CHST5Q9GZS9 411 aa13.05□□□□□ -0.32
DDX54-205ENST00000548786 RPUSD1Q9UJJ7 312 aaKnown RBP13.05□□□□□ -0.32
DDX54-205ENST00000548786 IGKV1-27A0A075B6S5 117 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 E9PI62 339 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 GATBO75879 557 aaKnown RBP13.04□□□□□ -0.32
DDX54-205ENST00000548786 GNAO1P09471 354 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 PGA5P0DJD9 388 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 CAPZA1P52907 286 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 ALKBH1Q13686 389 aaKnown RBP13.04□□□□□ -0.32
DDX54-205ENST00000548786 TMEM244Q5VVB8 128 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 METTL11BQ5VVY1 283 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 RBMS3Q6XE24 437 aaKnown RBP13.04□□□□□ -0.32
DDX54-205ENST00000548786 ACP7Q6ZNF0 438 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 ZNF788Q6ZQV5 615 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 DHRSXQ8N5I4 330 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 PACRGLQ8N7B6 248 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 ZNRF1Q8ND25 227 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 OR13C3Q8NGS6 347 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 SPATA3Q8NHX4 192 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 ITFG2Q969R8 447 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 SLAMF9Q96A28 289 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 ZNF48Q96MX3 618 aaPredicted RBP13.04□□□□□ -0.32
DDX54-205ENST00000548786 WDFY2Q96P53 400 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 TBX15Q96SF7 602 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 SLC25A10Q9UBX3 287 aaPredicted RBP13.04□□□□□ -0.32
DDX54-205ENST00000548786 NKX1-2Q9UD57 310 aaPredicted RBP13.04□□□□□ -0.32
DDX54-205ENST00000548786 OR14J1Q9UGF5 321 aa13.04□□□□□ -0.32
DDX54-205ENST00000548786 A0A0A6YYJ9 748 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 RFPL4AA6NLU0 287 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 OR4C45A6NMZ5 311 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 RFPL4AL1F8VTS6 287 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 SIGLEC5O15389 551 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 ECDO95905 644 aaPredicted RBP13.03□□□□□ -0.32
DDX54-205ENST00000548786 SERPINA3P01011 423 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 ACAA1P09110 424 aaPredicted RBP13.03□□□□□ -0.32
DDX54-205ENST00000548786 PPIAL4GP0DN37 164 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 TGM4P49221 684 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 ETV1P50549 477 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 DLX1P56177 255 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 ADARB1P78563 741 aaKnown RBP13.03□□□□□ -0.32
DDX54-205ENST00000548786 SMIM21Q3B7S5 101 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 KLHL22Q53GT1 634 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 ATPAF1Q5TC12 328 aaPredicted RBP13.03□□□□□ -0.32
DDX54-205ENST00000548786 OGFRL1Q5TC84 451 aaPredicted RBP13.03□□□□□ -0.32
DDX54-205ENST00000548786 TTC23Q5W5X9 447 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 FDX2Q6P4F2 183 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 LHX4Q969G2 390 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 RFT1Q96AA3 541 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 BORCS8Q96FH0 119 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 MED30Q96HR3 178 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 ZNF649Q9BS31 505 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 ZNF222Q9UK12 451 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 POLDIP2Q9Y2S7 368 aa13.03□□□□□ -0.32
DDX54-205ENST00000548786 A0A1W2PQ09 198 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 F8VVB4 439 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 F8VWA3 439 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 LIPFP07098 398 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 OCM2P0CE71 109 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 OCMP0CE72 109 aaPredicted RBP13.02□□□□□ -0.33
DDX54-205ENST00000548786 LIMS3P0CW19 117 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 LIMS4P0CW20 117 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 CALCBP10092 127 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 MMP9P14780 707 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 POU3F4P49335 361 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 CCR9P51686 369 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 GTF2A1P52655 376 aaPredicted RBP13.02□□□□□ -0.33
DDX54-205ENST00000548786 ACTG1P63261 375 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 CNN3Q15417 329 aaKnown RBP13.02□□□□□ -0.33
DDX54-205ENST00000548786 GPR157Q5UAW9 335 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 USP43Q70EL4 1123 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 SLC25A26Q70HW3 274 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 VMO1Q7Z5L0 202 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 SYS1Q8N2H4 156 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 CD177Q8N6Q3 437 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 ZDHHC22Q8N966 263 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 SETD9Q8NE22 299 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms