RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 VSTM5A8MXK1 200 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 IQCF6A8MYZ5 107 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 ZNF732B4DXR9 585 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 NDUFB6O95139 128 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 CRYAAP02489 173 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 CD74P04233 296 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 PPP3CBP16298 524 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 GNB3P16520 340 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 ANOS1P23352 680 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 MPZP25189 248 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 BTCP35070 178 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 TAS2R46P59540 309 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 SELENOVP59797 346 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 RPS23P62266 143 aaKnown RBP11.56□□□□□ -0.56
PTCH1-215ENST00000547672 MOGAT2Q3SYC2 334 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 SFRP4Q6FHJ7 346 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-215ENST00000547672 C1QL2Q7Z5L3 287 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 BIVMQ86UB2 503 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 LRRC46Q96FV0 321 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 Q96M66 194 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 SPACA1Q9HBV2 294 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 NGBQ9NPG2 151 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 TMEM100Q9NV29 134 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 ASF1BQ9NVP2 202 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 ING3Q9NXR8 418 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 POLDIP2Q9Y2S7 368 aa11.56□□□□□ -0.56
PTCH1-215ENST00000547672 C16orf97H3BN30 126 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 SOCS1O15524 211 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 ZNHIT1O43257 154 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 IL5P05113 134 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 GLAP06280 429 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 NAT1P18440 290 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 IL24Q13007 206 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 NHLRC3Q5JS37 347 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 ZNF474Q6S9Z5 364 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-215ENST00000547672 UNQ6494/PRO21346Q6UXR6 183 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 RFPL4BQ6ZWI9 263 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 SLC25A26Q70HW3 274 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 LIX1LQ8IVB5 337 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 ZNF611Q8N823 705 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 OR4C16Q8NGL9 310 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 SLC25A40Q8TBP6 338 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 ZCCHC14Q8WYQ9 949 aaKnown RBP11.55□□□□□ -0.56
PTCH1-215ENST00000547672 UPRTQ96BW1 309 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 NKX3-1Q99801 234 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-215ENST00000547672 PECRQ9BY49 303 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 ALX4Q9H161 411 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-215ENST00000547672 MED28Q9H204 178 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 NPDC1Q9NQX5 325 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-215ENST00000547672 ETAA1Q9NY74 926 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 GPR160Q9UJ42 338 aa11.55□□□□□ -0.56
PTCH1-215ENST00000547672 APC2O95996 2303 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 IGKV1-27A0A075B6S5 117 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 TRAV6A0A075B6T7 132 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 A0A1B0GUH1 482 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 C7orf66A4D0T2 115 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 LRP5LA4QPB2 252 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 POM121CA8CG34 1229 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 SNRPGP15A8MWD9 76 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 EEF1E1-BLOC1S5C9J1V9 151 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 MFNGO00587 321 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 SPRY1O43609 319 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-215ENST00000547672 AGFG2O95081 481 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 CD3DP04234 171 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 ACAA1P09110 424 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-215ENST00000547672 CECR9P0C854 216 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 PTHLHP12272 177 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 FUT3P21217 361 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 KITLGP21583 273 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 HAAOP46952 286 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 OR3A3P47888 321 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 MECP2P51608 486 aaKnown RBP11.54□□□□□ -0.56
PTCH1-215ENST00000547672 GPM6AP51674 278 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 CCR6P51684 374 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 TMEM50BP56557 158 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 GUCA2AQ02747 115 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 MPV17LQ2QL34 196 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 MBNL2Q5VZF2 373 aaKnown RBP11.54□□□□□ -0.56
PTCH1-215ENST00000547672 CD276Q5ZPR3 534 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 OR2T2Q6IF00 324 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 CRIP3Q6Q6R5 217 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 FIP1L1Q6UN15 594 aaKnown RBP11.54□□□□□ -0.56
PTCH1-215ENST00000547672 OR8G5Q8NG78 346 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 GCDHQ92947 438 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-215ENST00000547672 MARS2Q96GW9 593 aaKnown RBP11.54□□□□□ -0.56
PTCH1-215ENST00000547672 ARHGAP5-AS1Q96IT6 56 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 NICN1Q9BSH3 213 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 OR2J1Q9GZK6 312 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 C20orf85Q9H1P6 137 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 RIMS4Q9H426 269 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-215ENST00000547672 SLC2A8Q9NY64 477 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 ZNF221Q9UK13 617 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 ST3GAL6Q9Y274 331 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 ALG5Q9Y673 324 aa11.54□□□□□ -0.56
PTCH1-215ENST00000547672 IGHV2OR16-5A0A0B4J2B6 119 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 IGHV1-18A0A0C4DH31 117 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 A0A1W2PR80 420 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 FOXI3A8MTJ6 420 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-215ENST00000547672 J3QT63 122 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 ANGPTL7O43827 346 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms