RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 NLRC3Q7RTR2 1065 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 MS4A15Q8N5U1 240 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 POC1AQ8NBT0 407 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 TSEN15Q8WW01 171 aaKnown RBP12.09□□□□□ -0.47
DDX54-203ENST00000546869 THRSPQ92748 146 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 TMEM106AQ96A25 262 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 NEIL1Q96FI4 390 aaPredicted RBP12.09□□□□□ -0.47
DDX54-203ENST00000546869 OR5M11Q96RB7 305 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 LRRC42Q9Y546 428 aa12.09□□□□□ -0.47
DDX54-203ENST00000546869 ABCA1O95477 2261 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 FAM230AA0A1W2PPH8 454 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 C3orf80F5H4A9 247 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 AKR7A2O43488 359 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 ALDOBP05062 364 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 ZNF16P17020 682 aaPredicted RBP12.08□□□□□ -0.48
DDX54-203ENST00000546869 GLRA1P23415 457 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 GATA3P23771 443 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 EEF1B2P24534 225 aaKnown RBP12.08□□□□□ -0.48
DDX54-203ENST00000546869 CD80P33681 288 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 MTCP1P56278 107 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 TPBGQ13641 420 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 MED22Q15528 200 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 TBCEQ15813 527 aaPredicted RBP12.08□□□□□ -0.48
DDX54-203ENST00000546869 ZNF841Q6ZN19 808 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 GLCCI1Q86VQ1 547 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 CALHM1Q8IU99 346 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 BOLLQ8N9W6 283 aaKnown RBP12.08□□□□□ -0.48
DDX54-203ENST00000546869 DEFB108BQ8NET1 73 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 TMEM186Q96B77 213 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 OPALINQ96PE5 141 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 NRIP2Q9BQI9 281 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 SEBOXQ9HB31 216 aaPredicted RBP12.08□□□□□ -0.48
DDX54-203ENST00000546869 RHOFQ9HBH0 211 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 HES4Q9HCC6 221 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 YAE1D1Q9NRH1 226 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 KCNS2Q9ULS6 477 aa12.08□□□□□ -0.48
DDX54-203ENST00000546869 SYNGR1O43759 233 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 RPS2P15880 293 aaKnown RBP12.07□□□□□ -0.48
DDX54-203ENST00000546869 RAB3AP20336 220 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 ZFP36P26651 326 aaKnown RBP12.07□□□□□ -0.48
DDX54-203ENST00000546869 HOXA4Q00056 320 aaPredicted RBP12.07□□□□□ -0.48
DDX54-203ENST00000546869 MLLT11Q13015 90 aaPredicted RBP12.07□□□□□ -0.48
DDX54-203ENST00000546869 ESCO2Q56NI9 601 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 STUMQ69YW2 141 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 LYPD2Q6UXB3 125 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 UNQ9370/PRO34162Q6UXP9 181 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 ANGPTL5Q86XS5 388 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 MKXQ8IYA7 352 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 SAXO1Q8IYX7 474 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 ZFP41Q8N8Y5 198 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 C19orf18Q8NEA5 215 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 OR8B3Q8NGG8 313 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 OR13C9Q8NGT0 318 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 ANGPTL6Q8NI99 470 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 TRMT10AQ8TBZ6 339 aaKnown RBP12.07□□□□□ -0.48
DDX54-203ENST00000546869 TMIGD2Q96BF3 282 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 CPNE2Q96FN4 548 aaPredicted RBP12.07□□□□□ -0.48
DDX54-203ENST00000546869 OR8B2Q96RD0 313 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 CCDC90BQ9GZT6 254 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 WDR13Q9H1Z4 485 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 NLKQ9UBE8 527 aa12.07□□□□□ -0.48
DDX54-203ENST00000546869 HIVEP2P31629 2446 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 TRBV5-7A0A0A0MS05 114 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 KIAA1324LA8MWY0 1029 aaPredicted RBP12.06□□□□□ -0.48
DDX54-203ENST00000546869 ZNF879B4DU55 563 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 GPR37O15354 613 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 SC5DO75845 299 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 OCMP0CE72 109 aaPredicted RBP12.06□□□□□ -0.48
DDX54-203ENST00000546869 IGFBP3P17936 291 aaPredicted RBP12.06□□□□□ -0.48
DDX54-203ENST00000546869 FSTP19883 344 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 MAPK3P27361 379 aaPredicted RBP12.06□□□□□ -0.48
DDX54-203ENST00000546869 SOX2P48431 317 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 PITPNBP48739 271 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 SEC61A1P61619 476 aaKnown RBP12.06□□□□□ -0.48
DDX54-203ENST00000546869 EMX1Q04741 257 aaPredicted RBP12.06□□□□□ -0.48
DDX54-203ENST00000546869 PDZK1IP1Q13113 114 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 ASPHD2Q6ICH7 369 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 CRIP3Q6Q6R5 217 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 ACP7Q6ZNF0 438 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 ZNF788Q6ZQV5 615 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 SLC36A1Q7Z2H8 476 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 Q8IYB0 196 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 ZSCAN4Q8NAM6 433 aaPredicted RBP12.06□□□□□ -0.48
DDX54-203ENST00000546869 NPRL2Q8WTW4 380 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 MED30Q96HR3 178 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 DMRTB1Q96MA1 342 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 SSBP3Q9BWW4 388 aaPredicted RBP12.06□□□□□ -0.48
DDX54-203ENST00000546869 ACOT13Q9NPJ3 140 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 HIF1ANQ9NWT6 349 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 MTCH1Q9NZJ7 389 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 DNAJB11Q9UBS4 358 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 CLN8Q9UBY8 286 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 FOXJ3Q9UPW0 622 aa12.06□□□□□ -0.48
DDX54-203ENST00000546869 OR2AT4A6NND4 320 aa12.05□□□□□ -0.48
DDX54-203ENST00000546869 J3QLI3 93 aa12.05□□□□□ -0.48
DDX54-203ENST00000546869 MAGEB3O15480 346 aa12.05□□□□□ -0.48
DDX54-203ENST00000546869 ADAM20O43506 726 aa12.05□□□□□ -0.48
DDX54-203ENST00000546869 CYB5AP00167 134 aa12.05□□□□□ -0.48
DDX54-203ENST00000546869 GYPAP02724 150 aa12.05□□□□□ -0.48
DDX54-203ENST00000546869 CPEP16870 476 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms