RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 NMNAT2Q9BZQ4 307 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 MEX3AA1L020 520 aaKnown RBP10.16□□□□□ -0.78
SCAF11-208ENST00000546534 LPLP06858 475 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 CLUP10909 449 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 SPI1P17947 270 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 AZGP1P25311 298 aaKnown RBP10.16□□□□□ -0.78
SCAF11-208ENST00000546534 OPRL1P41146 370 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 GNG3P63215 75 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 DGCR2P98153 550 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 SLC34A1Q06495 639 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 TSPAN31Q12999 210 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 CRMP1Q14194 572 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 ZNF770Q6IQ21 691 aaPredicted RBP10.16□□□□□ -0.78
SCAF11-208ENST00000546534 LCN8Q6JVE9 175 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 OR52L1Q8NGH7 329 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 OR6K6Q8NGW6 343 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 GNPDA2Q8TDQ7 276 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 TFAP2CQ92754 450 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 ZNF488Q96MN9 340 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 MCRIP2Q9BUT9 160 aaKnown RBP10.16□□□□□ -0.78
SCAF11-208ENST00000546534 RASL12Q9NYN1 266 aa10.16□□□□□ -0.78
SCAF11-208ENST00000546534 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.16□□□□□ -0.78
SCAF11-208ENST00000546534 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
SCAF11-208ENST00000546534 H0YHG0 523 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 ZFPL1O95159 310 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 TK1P04183 234 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 CD24P25063 80 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 THBS3P49746 956 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 SMIM21Q3B7S5 101 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 CEACAM21Q3KPI0 293 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 ABCA11PQ4W5N1 156 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 CEP78Q5JTW2 689 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 HAGHLQ6PII5 290 aaPredicted RBP10.15□□□□□ -0.78
SCAF11-208ENST00000546534 UNQ9370/PRO34162Q6UXP9 181 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 POC1AQ8NBT0 407 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 OR8D4Q8NGM9 314 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 OR6N2Q8NGY6 317 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 MUC7Q8TAX7 377 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 ASCL2Q99929 193 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 KCTD14Q9BQ13 255 aaPredicted RBP10.15□□□□□ -0.78
SCAF11-208ENST00000546534 ZNF649Q9BS31 505 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 DCAF13Q9NV06 445 aaKnown RBP10.15□□□□□ -0.78
SCAF11-208ENST00000546534 CDH10Q9Y6N8 788 aa10.15□□□□□ -0.78
SCAF11-208ENST00000546534 SH2D7A6NKC9 451 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-208ENST00000546534 H3BUI4 141 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 SLC22A2O15244 555 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 H2BFMP0C1H6 154 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 ZNF728P0DKX0 622 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 IGHV1-8P0DP01 117 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 IFNGR2P38484 337 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 LINC01590Q5TEZ4 76 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 MINOS1Q5TGZ0 78 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 GLYATQ6IB77 296 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 C8orf82Q6P1X6 216 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-208ENST00000546534 C16orf82Q7Z2V1 217 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 PIGWQ7Z7B1 504 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 ERI1Q8IV48 349 aaKnown RBP10.14□□□□□ -0.79
SCAF11-208ENST00000546534 OR51D1Q8NGF3 324 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 OR5A2Q8NGI9 324 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 OR8B4Q96RC9 309 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 HOPXQ9BPY8 73 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-208ENST00000546534 IL20Q9NYY1 176 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 ZMAT5Q9UDW3 170 aaKnown RBP10.14□□□□□ -0.79
SCAF11-208ENST00000546534 SAMD4AQ9UPU9 718 aaKnown RBP10.14□□□□□ -0.79
SCAF11-208ENST00000546534 MINOS1-NBL1R4GNA1 71 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 V9GYQ6 96 aa10.14□□□□□ -0.79
SCAF11-208ENST00000546534 DYNC2H1Q8NCM8 4307 aaKnown RBP10.14□□□□□ -0.79
SCAF11-208ENST00000546534 RBP4P02753 201 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 SEMG1P04279 462 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 NUDT2P50583 147 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 BLVRAP53004 296 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 ACTA2P62736 377 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 ACTG2P63267 376 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 ACTC1P68032 377 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 ACTA1P68133 377 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 DOC2BQ14184 412 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 RPL13AP3Q6NVV1 102 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 KRT74Q7RTS7 529 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.13□□□□□ -0.79
SCAF11-208ENST00000546534 OR8B12Q8NGG6 310 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 NDNFQ8TB73 568 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 FAM81AQ8TBF8 368 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 AKR1E2Q96JD6 320 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 INTS14Q96SY0 518 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 TBC1D23Q9NUY8 699 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 OR14J1Q9UGF5 321 aa10.13□□□□□ -0.79
SCAF11-208ENST00000546534 TMEM238LA0A1B0GVL6 79 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 OR5B21A6NL26 309 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 RAMP3O60896 148 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 AMY1AP04745 511 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 AMY2AP04746 511 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 PGA5P0DJD9 388 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 RRM2P31350 389 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 C18orf65Q6ZTR6 163 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 MOB3CQ70IA8 216 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 SHFQ7M4L6 423 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 BATF2Q8N1L9 274 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 OSR2Q8N2R0 312 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 OR9Q2Q8NGE9 314 aa10.12□□□□□ -0.79
SCAF11-208ENST00000546534 OR4Q3Q8NH05 313 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms