RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 MTCP1P56278 107 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 GMFBP60983 142 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 ZMYND11Q15326 602 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 ZNF181Q2M3W8 571 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 HSD17B12Q53GQ0 312 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 NR2C2APQ86WQ0 139 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 LRRC29Q8WV35 223 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 FAM168AQ92567 244 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 CHCHD6Q9BRQ6 235 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 VCX3AQ9NNX9 186 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 TMEM138Q9NPI0 162 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 DLL4Q9NR61 685 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 MTCH1Q9NZJ7 389 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 FOXJ3Q9UPW0 622 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 WIPI2Q9Y4P8 454 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 hCG_1807616A0A1W2PRN6 198 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 TFF1P04155 84 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 BDKRB2P30411 391 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 CD80P33681 288 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 PDLIM4P50479 330 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 DDI2Q5TDH0 399 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 SFRP4Q6FHJ7 346 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-217ENST00000545738 PRSS57Q6UWY2 283 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 SLC16A12Q6ZSM3 486 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 LHFPL2Q6ZUX7 228 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 CIARTQ8N365 385 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-217ENST00000545738 ERGIC1Q969X5 290 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 FUNDC2Q9BWH2 189 aa13.67□□□□□ -0.22
LIMS2-217ENST00000545738 YLPM1P49750 1951 aaKnown RBP13.66□□□□□ -0.22
LIMS2-217ENST00000545738 SRRM5B3KS81 715 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 J3QT63 122 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 PPIHO43447 177 aaKnown RBP13.66□□□□□ -0.22
LIMS2-217ENST00000545738 IGHV2-70P01814 119 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 PRKACBP22694 351 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 FGF9P31371 208 aaPredicted RBP13.66□□□□□ -0.22
LIMS2-217ENST00000545738 CFHR2P36980 270 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 OR3A4PP47883 348 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 NPBWR2P48146 333 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 POU3F4P49335 361 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 PPP3R1P63098 170 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 MZT1Q08AG7 82 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 CLEC2AQ6UVW9 174 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 SLC25A26Q70HW3 274 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 ZNF573Q86YE8 665 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 BOLLQ8N9W6 283 aaKnown RBP13.66□□□□□ -0.22
LIMS2-217ENST00000545738 NARFLQ9H6Q4 476 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 EXOSC4Q9NPD3 245 aaKnown RBP13.66□□□□□ -0.22
LIMS2-217ENST00000545738 RNF7Q9UBF6 113 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 IL36RNQ9UBH0 155 aa13.66□□□□□ -0.22
LIMS2-217ENST00000545738 IGHV3OR15-7A0A075B7D8 119 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 IGHV4-61A0A0C4DH41 118 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 LOC100506127A0A0U1RQW1 187 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 SMIM30A4D0T7 59 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 ALDOBP05062 364 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 PGA5P0DJD9 388 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 GALP22466 123 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 ATP1B3P54709 279 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 OR10A3P58181 314 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 ERVK11-1P61568 191 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 PDZK1IP1Q13113 114 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 SATL1Q86VE3 508 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 MAPK1IP1LQ8NDC0 245 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 SLAMF9Q96A28 289 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 MYOZ1Q9NP98 299 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-217ENST00000545738 CKLFQ9UBR5 152 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 NPTNQ9Y639 398 aa13.65□□□□□ -0.22
LIMS2-217ENST00000545738 CLDN25C9JDP6 229 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 SFTPBP07988 381 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 CALCBP10092 127 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 IL2RGP31785 369 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 ZNF93P35789 620 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-217ENST00000545738 NR4A2P43354 598 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 TMEM33P57088 247 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 LSM3P62310 102 aaKnown RBP13.64□□□□□ -0.23
LIMS2-217ENST00000545738 IL24Q13007 206 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 SHEQ5VZ18 495 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 FAM90A1Q86YD7 464 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 OR4D6Q8NGJ1 314 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 NRIP2Q9BQI9 281 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 PKIBQ9C010 78 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 CNTD2Q9H8S5 307 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 TCF7L1Q9HCS4 588 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 AK6Q9Y3D8 172 aaKnown RBP13.64□□□□□ -0.23
LIMS2-217ENST00000545738 A0A1B0GW55 424 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 FCN3O75636 299 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 OCMP0CE72 109 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-217ENST00000545738 DUX4L2P0CJ85 424 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 DUX4L3P0CJ86 424 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 DUX4L4P0CJ87 422 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 DUX4L5P0CJ88 424 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 DUX4L6P0CJ89 424 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 DUX4L7P0CJ90 424 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 CD37P11049 281 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 AMY2BP19961 511 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 BCL3P20749 454 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 GPR6P46095 362 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-217ENST00000545738 BTG1P62324 171 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 DUX4L9Q6RFH8 374 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-217ENST00000545738 DEFB108BQ8NET1 73 aa13.64□□□□□ -0.23
LIMS2-217ENST00000545738 PHYHIPQ92561 330 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms