RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 DNTTIP1Q9H147 329 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ESM1Q9NQ30 184 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 CLN6Q9NWW5 311 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF69Q9UC07 566 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 NUFIP1Q9UHK0 495 aaKnown RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 COPS3Q9UNS2 423 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ANK2Q01484 3957 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 TMEM89A2RUT3 159 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 DNAJC9-AS1A6NH13 148 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 OR5B21A6NL26 309 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 DHRS7CA6NNS2 312 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF850A8MQ14 1090 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF879B4DU55 563 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 LOC110117498-PIK3R3F6TDL0 507 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 CLDN34H7C241 214 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 PSMD9O00233 223 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 SRSF10O75494 262 aaKnown RBP6.35□□□□□ -1.39
SNHG1-223ENST00000545440 DHRS3O75911 302 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 ECDO95905 644 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-223ENST00000545440 GYPAP02724 150 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 IGHV4-38-2P0DP08 117 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 PEX2P28328 305 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 MTNR1AP48039 350 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 HCCSP53701 268 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 BPIFB3P59826 476 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 CXCR4P61073 352 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 ACTR3P61158 418 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 UBA52P62987 128 aaKnown RBP6.35□□□□□ -1.39
SNHG1-223ENST00000545440 GNG3P63215 75 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 MFGE8Q08431 387 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-223ENST00000545440 TMED1Q13445 227 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 GPR157Q5UAW9 335 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 STUMQ69YW2 141 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 ZFP1Q6P2D0 407 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 SLC36A1Q7Z2H8 476 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 BCDIN3DQ7Z5W3 292 aaKnown RBP6.35□□□□□ -1.39
SNHG1-223ENST00000545440 COMMD2Q86X83 199 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 SIGLECL1Q8N7X8 197 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 PNLDC1Q8NA58 520 aaKnown RBP6.35□□□□□ -1.39
SNHG1-223ENST00000545440 OR8J1Q8NGP2 316 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 PIGCQ92535 297 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 RBM4BQ9BQ04 359 aaKnown RBP6.35□□□□□ -1.39
SNHG1-223ENST00000545440 TTTY10Q9BZA0 68 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 MS4A7Q9GZW8 240 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-223ENST00000545440 PBOV1Q9GZY1 135 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 SEMA6AQ9H2E6 1030 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 PPP1R3EQ9H7J1 279 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 GPR84Q9NQS5 396 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 WARS2Q9UGM6 360 aaKnown RBP6.35□□□□□ -1.39
SNHG1-223ENST00000545440 IKZF2Q9UKS7 526 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 R4GMQ9 66 aa6.35□□□□□ -1.39
SNHG1-223ENST00000545440 IGHV3OR15-7A0A075B7D8 119 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 NKX6-3A6NJ46 265 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 SAC3D1A6NKF1 404 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF670-ZNF695F2Z2N8 137 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 P2RY10O00398 339 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 DVL1O14640 695 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 CDIPTO14735 213 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 MTRF1O75570 445 aaKnown RBP6.34□□□□□ -1.39
SNHG1-223ENST00000545440 FCN3O75636 299 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 TTRP02766 147 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 ALPLP05186 524 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 MMP9P14780 707 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 PRTN3P24158 256 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 HTR1FP30939 366 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 GPM6AP51674 278 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 FGF12P61328 243 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 RIPPLY1Q0D2K3 151 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 CEACAM21Q3KPI0 293 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 WDR38Q5JTN6 314 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 BCL2L15Q5TBC7 163 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 ATPAF1Q5TC12 328 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-223ENST00000545440 METTL11BQ5VVY1 283 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 C12orf54Q6X4T0 127 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 CCDC121Q6ZUS5 278 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 KCTD8Q6ZWB6 473 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 SCCPDHQ8NBX0 429 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 OR51G2Q8NGK0 314 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 OR51E1Q8TCB6 317 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 PYDC1Q8WXC3 89 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 RPL3LQ92901 407 aaKnown RBP6.34□□□□□ -1.39
SNHG1-223ENST00000545440 RFKQ969G6 155 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 RNF170Q96K19 258 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 C1orf147Q96MC9 270 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF48Q96MX3 618 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-223ENST00000545440 RAB3IPQ96QF0 476 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-223ENST00000545440 HIST1H2AAQ96QV6 131 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 IL4I1Q96RQ9 567 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 FGF23Q9GZV9 251 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-223ENST00000545440 MEGF9Q9H1U4 602 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 RIBC2Q9H4K1 309 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 USE1Q9NZ43 259 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 DNAJB11Q9UBS4 358 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 ENPP5Q9UJA9 477 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 RPUSD1Q9UJJ7 312 aaKnown RBP6.34□□□□□ -1.39
SNHG1-223ENST00000545440 SNX5Q9Y5X3 404 aa6.34□□□□□ -1.39
SNHG1-223ENST00000545440 TENM1Q9UKZ4 2725 aa6.34□□□□□ -1.4
SNHG1-223ENST00000545440 IGHV3OR16-10A0A075B7F0 116 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 A0A1B0GVI7 797 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 ZNF732B4DXR9 585 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms