RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 KLHL22Q53GT1 634 aa11.72□□□□□ -0.53
RTN3-214ENST00000545432 ARSJQ5FYB0 599 aaPredicted RBP11.72□□□□□ -0.53
RTN3-214ENST00000545432 GLYATQ6IB77 296 aa11.72□□□□□ -0.53
RTN3-214ENST00000545432 HACD2Q6Y1H2 254 aa11.72□□□□□ -0.53
RTN3-214ENST00000545432 PIGWQ7Z7B1 504 aa11.72□□□□□ -0.53
RTN3-214ENST00000545432 OR8D4Q8NGM9 314 aa11.72□□□□□ -0.53
RTN3-214ENST00000545432 P2RX4Q99571 388 aa11.72□□□□□ -0.53
RTN3-214ENST00000545432 GORASP2Q9H8Y8 452 aa11.72□□□□□ -0.53
RTN3-214ENST00000545432 HES4Q9HCC6 221 aa11.72□□□□□ -0.53
RTN3-214ENST00000545432 LYSTQ99698 3801 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 H3BUI4 141 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 CHRM2P08172 466 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 SLC6A1P30531 599 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 CEBPDP49716 269 aaPredicted RBP11.71□□□□□ -0.53
RTN3-214ENST00000545432 GFOD2Q3B7J2 385 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 SMIM21Q3B7S5 101 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 RASSF6Q6ZTQ3 369 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 SHFQ7M4L6 423 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 OR52L1Q8NGH7 329 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 MUC7Q8TAX7 377 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 VIPAS39Q9H9C1 493 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 DNAJC27Q9NZQ0 273 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 HHLA2Q9UM44 414 aa11.71□□□□□ -0.53
RTN3-214ENST00000545432 IGLV3-1P01715 115 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 MYCNOSP40205 109 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 ERVK11-1P61568 191 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 CGB2Q6NT52 195 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 UNQ9370/PRO34162Q6UXP9 181 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 TCF23Q7RTU1 214 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 OSR2Q8N2R0 312 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 OR51D1Q8NGF3 324 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 PYURFQ96I23 114 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 AKR1E2Q96JD6 320 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 INTS14Q96SY0 518 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 KCTD14Q9BQ13 255 aaPredicted RBP11.7□□□□□ -0.54
RTN3-214ENST00000545432 NRIP2Q9BQI9 281 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 C1orf21Q9H246 121 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 BRD7Q9NPI1 651 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 BAIAP2Q9UQB8 552 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 HILPDAQ9Y5L2 63 aa11.7□□□□□ -0.54
RTN3-214ENST00000545432 A0A0U1RQV5 110 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 LCE6AA0A183 80 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 ACOD1A6NK06 481 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 ZNF737O75373 536 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 OR2F2O95006 317 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 LPLP06858 475 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 H2BFMP0C1H6 154 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 ATP6V1B1P15313 513 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 MPZP25189 248 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 MAP2K3P46734 347 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 MEF2CQ06413 473 aaPredicted RBP11.69□□□□□ -0.54
RTN3-214ENST00000545432 SLC34A1Q06495 639 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 HAGHLQ6PII5 290 aaPredicted RBP11.69□□□□□ -0.54
RTN3-214ENST00000545432 OR8B12Q8NGG6 310 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 OR6N2Q8NGY6 317 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 OR4Q3Q8NH05 313 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 RBM14Q96PK6 669 aaKnown RBP11.69□□□□□ -0.54
RTN3-214ENST00000545432 BTBD10Q9BSF8 475 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 NIPAL2Q9H841 368 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 SEBOXQ9HB31 216 aaPredicted RBP11.69□□□□□ -0.54
RTN3-214ENST00000545432 TBC1D23Q9NUY8 699 aa11.69□□□□□ -0.54
RTN3-214ENST00000545432 CCDC159P0C7I6 412 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 COX4I1P13073 169 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 CHATP28329 748 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 RRM2P31350 389 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 RPL23AP62750 156 aaKnown RBP11.68□□□□□ -0.54
RTN3-214ENST00000545432 ABCA11PQ4W5N1 156 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 CEP78Q5JTW2 689 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 LCN1P1Q5VSP4 162 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 TRPM8Q7Z2W7 1104 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 OR4P4Q8NGL7 312 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 OR6K6Q8NGW6 343 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 OTOSQ8NHW6 89 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 ZNF488Q96MN9 340 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 EFCAB1Q9HAE3 211 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 IL1RAPQ9NPH3 570 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 ZFP57Q9NU63 452 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 PCDHGB5Q9Y5G0 923 aa11.68□□□□□ -0.54
RTN3-214ENST00000545432 IGHV2-26A0A0B4J1V2 119 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
RTN3-214ENST00000545432 J3QT63 122 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 GASTP01350 101 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 GSTT1P30711 240 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 GP2P55259 537 aaKnown RBP11.67□□□□□ -0.54
RTN3-214ENST00000545432 PSMA6P60900 246 aaKnown RBP11.67□□□□□ -0.54
RTN3-214ENST00000545432 ACTA2P62736 377 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 ACTG2P63267 376 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 ACTC1P68032 377 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 ACTA1P68133 377 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 IL18R1Q13478 541 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 DOC2BQ14184 412 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 TMEM42Q69YG0 159 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 OR2W3Q7Z3T1 314 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 ERI1Q8IV48 349 aaKnown RBP11.67□□□□□ -0.54
RTN3-214ENST00000545432 LINC00471Q8N535 108 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 ZNF454Q8N9F8 522 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 TSSK6Q9BXA6 273 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 CMC2Q9NRP2 79 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 DNAJB9Q9UBS3 223 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 SESN1Q9Y6P5 492 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms