RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 MRPL3P09001 348 aaKnown RBP11.48□□□□□ -0.57
DDX11-228ENST00000545115 PGA5P0DJD9 388 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 RIDAP52758 137 aaKnown RBP11.48□□□□□ -0.57
DDX11-228ENST00000545115 ROM1Q03395 351 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 SNAPC1Q16533 368 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 ZNF684Q5T5D7 378 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 TMEM236Q5W0B7 351 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 CRIP3Q6Q6R5 217 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 LIAT1Q6ZQX7 453 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 AQP12AQ8IXF9 295 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 CD177Q8N6Q3 437 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 OR8B4Q96RC9 309 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 TEAD3Q99594 435 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 C1orf21Q9H246 121 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 USE1Q9NZ43 259 aa11.48□□□□□ -0.57
DDX11-228ENST00000545115 CCDC182A6NF36 153 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 PRR32B1ATL7 298 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 J3QT63 122 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 OPN1MWP04001 364 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 OPN1MW2P0DN77 364 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 OPN1MW3P0DN78 364 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 T-ENOLP0DO92 83 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 PRKACGP22612 351 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 HAAOP46952 286 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 LGALS4P56470 323 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 ZNF573Q86YE8 665 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 C11orf42Q8N5U0 333 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 KLHDC1Q8N7A1 406 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 DTX3Q8N9I9 347 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 DNAJC9Q8WXX5 260 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 CFHR4Q92496 578 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 ZNF488Q96MN9 340 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 TTTY10Q9BZA0 68 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 MOB1AQ9H8S9 216 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 TVP23BQ9NYZ1 205 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 IKZF2Q9UKS7 526 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 COPS3Q9UNS2 423 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 FOXJ3Q9UPW0 622 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 POLDIP2Q9Y2S7 368 aa11.47□□□□□ -0.57
DDX11-228ENST00000545115 SYNGR1O43759 233 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 NOS1APO75052 506 aaPredicted RBP11.46□□□□□ -0.57
DDX11-228ENST00000545115 NXPH2O95156 264 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 TTRP02766 147 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 CCL3L1P16619 93 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 COX7A1P24310 79 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 PAX6P26367 422 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 PRDX2P32119 198 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 CEBPDP49716 269 aaPredicted RBP11.46□□□□□ -0.57
DDX11-228ENST00000545115 BMXP51813 675 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 ERVFRD-1P60508 538 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 MFGE8Q08431 387 aaPredicted RBP11.46□□□□□ -0.57
DDX11-228ENST00000545115 BEAN1Q3B7T3 259 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 CLVS2Q5SYC1 327 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 TMEM42Q69YG0 159 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 TMEM200BQ69YZ2 307 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 C11orf44Q8N8P7 122 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 CCDC197Q8NCU1 140 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 OR4M1Q8NGD0 313 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 OR2T27Q8NH04 317 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 PPP1R14AQ96A00 147 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 CNN2Q99439 309 aaKnown RBP11.46□□□□□ -0.57
DDX11-228ENST00000545115 THTPAQ9BU02 230 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 GTF2A1LQ9UNN4 478 aa11.46□□□□□ -0.57
DDX11-228ENST00000545115 PQLC2LA1A4F0 135 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 LOC110117498-PIK3R3F6TDL0 507 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 G3V4G9 280 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 DLGAP1O14490 977 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 CHST1O43916 411 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 CRISP1P54107 249 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 ESRRGP62508 458 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 CBX1P83916 185 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 ZNF273Q14593 569 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 ZNF782Q6ZMW2 699 aaPredicted RBP11.45□□□□□ -0.58
DDX11-228ENST00000545115 CALHM1Q8IU99 346 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 PIFOQ8TCI5 191 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 NRIP2Q9BQI9 281 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 PRRG3Q9BZD7 231 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 HES4Q9HCC6 221 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 PAPOLBQ9NRJ5 636 aaKnown RBP11.45□□□□□ -0.58
DDX11-228ENST00000545115 GPR173Q9NS66 373 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 DNAJB9Q9UBS3 223 aa11.45□□□□□ -0.58
DDX11-228ENST00000545115 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.45□□□□□ -0.58
DDX11-228ENST00000545115 DHRS7CA6NNS2 312 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 VGLL3A8MV65 326 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 FKBP6O75344 327 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 SRSF10O75494 262 aaKnown RBP11.44□□□□□ -0.58
DDX11-228ENST00000545115 FAM107AO95990 144 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 TK1P04183 234 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 VSIG10L2P0DP72 767 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 MPZP25189 248 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 CXCR4P61073 352 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 ACTR3P61158 418 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 FLOT2Q14254 428 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 KPRPQ5T749 579 aaPredicted RBP11.44□□□□□ -0.58
DDX11-228ENST00000545115 BCL2L15Q5TBC7 163 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 SAMD5Q5TGI4 173 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 HIST2H2BDQ6DRA6 164 aa11.44□□□□□ -0.58
DDX11-228ENST00000545115 ZNF322Q6U7Q0 402 aaPredicted RBP11.44□□□□□ -0.58
DDX11-228ENST00000545115 ASRGL1Q7L266 308 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms