RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 NDEL1Q9GZM8 345 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 POLR2J3Q9H1A7 115 aaKnown RBP3.21□□□□□ -1.9
SNHG1-220ENST00000544550 DCLRE1BQ9H816 532 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 GRPEL1Q9HAV7 217 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 AIG1Q9NVV5 245 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 THAP1Q9NVV9 213 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 CHCHD3Q9NX63 227 aaKnown RBP3.21□□□□□ -1.9
SNHG1-220ENST00000544550 HAO2Q9NYQ3 351 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF391Q9UJN7 358 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 MINOS1-NBL1R4GNA1 71 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 FAM90A7PA6NKC0 464 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 FAM90A12PA8MX19 464 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 FAM90A23PA8MXZ1 464 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ODF3BA8MYP8 253 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 A8MZ25 164 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 F5H5K5 113 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 KHDRBS3O75525 346 aaKnown RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 OR2F2O95006 317 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 RBP4P02753 201 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 HCKP08631 526 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ACAA1P09110 424 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ACSM4P0C7M7 580 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 IGHV1-8P0DP01 117 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 SELLP14151 372 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 GP9P14770 177 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 CTLA4P16410 223 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 HOXB9P17482 250 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 IL12AP29459 219 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 SOX2P48431 317 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ENTPD1P49961 510 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 RPL14P50914 215 aaKnown RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 RPS6KA3P51812 740 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 RPL31P62899 125 aaKnown RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 CKAP4Q07065 602 aaKnown RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 SCARB2Q14108 478 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 KIR2DS1Q14954 304 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 BAK1Q16611 211 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 KRTAP27-1Q3LI81 207 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 C9orf152Q5JTZ5 239 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF626Q68DY1 528 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 SUMO4Q6EEV6 95 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 TEX38Q6PEX7 206 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 DNM1P34Q6PK57 102 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 C10orf99Q6UWK7 81 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ZBTB49Q6ZSB9 765 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 TSEN54Q7Z6J9 526 aaKnown RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 LYPD6Q86Y78 171 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 SGPP2Q8IWX5 399 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 C4orf33Q8N1A6 199 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 DYNAPQ8N1N2 210 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 FTMTQ8N4E7 242 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 TMEM185AQ8NFB2 350 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 OR1M1Q8NGA1 313 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 OR11H6Q8NGC7 330 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 OR6T1Q8NGN1 323 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 OR10Z1Q8NGY1 313 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ANGPTL6Q8NI99 470 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 NDNFQ8TB73 568 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 TMEM239Q8WW34 195 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 RASSF5Q8WWW0 418 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 STMN2Q93045 179 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 SPTSSAQ969W0 71 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ST6GALNAC6Q969X2 333 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 VPS33AQ96AX1 596 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 APOPT1Q96IL0 206 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 LYZL4Q96KX0 146 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 RBM14Q96PK6 669 aaKnown RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 GAFA1Q96PS6 74 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 RAB3IPQ96QF0 476 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 CDRT15Q96T59 188 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 SLC25A33Q9BSK2 321 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 FUZQ9BT04 418 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ABHD14AQ9BUJ0 271 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 GON7Q9BXV9 100 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 PAIP1Q9H074 479 aaKnown RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 TLNRD1Q9H1K6 362 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 TMEM38AQ9H6F2 299 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ABCB9Q9NP78 766 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 MEPEQ9NQ76 525 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-220ENST00000544550 ARL8BQ9NVJ2 186 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 NLKQ9UBE8 527 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 KCNG2Q9UJ96 466 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 HSF4Q9ULV5 492 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 MED31Q9Y3C7 131 aa3.2□□□□□ -1.9
SNHG1-220ENST00000544550 STARD9Q9P2P6 4700 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 HUWE1Q7Z6Z7 4374 aaKnown RBP3.19□□□□□ -1.9
SNHG1-220ENST00000544550 DNAH7Q8WXX0 4024 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 PRSS37A4D1T9 235 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 SH2D7A6NKC9 451 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-220ENST00000544550 TMEM210A6NLX4 147 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 ANXA2P2A6NMY6 339 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 OR2AT4A6NND4 320 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 PRR23D1E9PI22 279 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-220ENST00000544550 M0R135 149 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 SLC1A7O00341 560 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 CCRL2O00421 344 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 CDIPTO14735 213 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 XRCC2O43543 280 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms