RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 P2RX4Q99571 388 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 ZNF2Q9BSG1 426 aaPredicted RBP9.11□□□□□ -0.95
TCF4-209ENST00000544241 CBLN4Q9NTU7 201 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 LRIT1Q9P2V4 623 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 TRAV1-1A0A0B4J248 108 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 IGLON5A6NGN9 336 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 ZNF732B4DXR9 585 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 C11orf98E9PRG8 122 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 LATO43561 262 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 EDN3P14138 238 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 P2RY2P41231 377 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 TSPAN7P41732 249 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 GNG10P50151 68 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 VAMP2P63027 116 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 CCL20P78556 96 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 MRPS11P82912 194 aaKnown RBP9.11□□□□□ -0.95
TCF4-209ENST00000544241 INSM1Q01101 510 aaPredicted RBP9.11□□□□□ -0.95
TCF4-209ENST00000544241 EWSR1Q01844 656 aaKnown RBP eCLIP9.11□□□□□ -0.95
TCF4-209ENST00000544241 LGI3Q8N145 548 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 OR2C3Q8N628 320 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 ZNF248Q8NDW4 579 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 HLA-CQ95604 372 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 BOD1Q96IK1 185 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 BTF3L4Q96K17 158 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 OR5B12Q96R08 314 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 ZFYVE21Q9BQ24 234 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 MYOFQ9NZM1 2061 aa9.11□□□□□ -0.95
TCF4-209ENST00000544241 PGA3P0DJD8 388 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 CTLA4P16410 223 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 GALNSP34059 522 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 IDH3GP51553 393 aaPredicted RBP9.1□□□□□ -0.95
TCF4-209ENST00000544241 TMEM50BP56557 158 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 RAB11AP62491 216 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 HIST1H3AP68431 136 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 EIF3IQ13347 325 aaKnown RBP9.1□□□□□ -0.95
TCF4-209ENST00000544241 PMS2P11Q13670 270 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 ALKBH2Q6NS38 261 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 ZNF66Q6ZN08 573 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 CA13Q8N1Q1 262 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 ADAT3Q96EY9 351 aaPredicted RBP9.1□□□□□ -0.95
TCF4-209ENST00000544241 GPER1Q99527 375 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 PCED1AQ9H1Q7 454 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 NAA60Q9H7X0 242 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 PLEKHF2Q9H8W4 249 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 FKBP11Q9NYL4 201 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 CISD1Q9NZ45 108 aaKnown RBP9.1□□□□□ -0.95
TCF4-209ENST00000544241 PILRAQ9UKJ1 303 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 GOLGA4Q13439 2230 aaKnown RBP9.1□□□□□ -0.95
TCF4-209ENST00000544241 SCN2AQ99250 2005 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 A0A0A6YYD4 124 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 LOC102723971A0A1B0GUV8 181 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 BLACEA4D250 179 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 XRCC2O43543 280 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 AHSA1O95433 338 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 DIRAS3O95661 229 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 SCGB1D1O95968 90 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 IGHMP01871 453 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 C8AP07357 584 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 NPSP0C0P6 89 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 CISD3P0C7P0 127 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 SPTBP11277 2137 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 HSD17B7P56937 341 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 PIGPP57054 158 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 SRPXP78539 464 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 COL10A1Q03692 680 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 BAXQ07812 192 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 KIF26BQ2KJY2 2108 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 FAM78AQ5JUQ0 283 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 CMTM1Q8IZ96 169 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 H1FOOQ8IZA3 346 aaPredicted RBP9.1□□□□□ -0.95
TCF4-209ENST00000544241 SLC39A11Q8N1S5 342 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 FAM89BQ8N5H3 189 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 TMEM52Q8NDY8 209 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 OR51T1Q8NGJ9 327 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 RNF133Q8WVZ7 376 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 DNASE2BQ8WZ79 361 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 TSLPQ969D9 159 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 ABHD14BQ96IU4 210 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 FOXN4Q96NZ1 517 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 GAL3ST2Q9H3Q3 398 aa9.1□□□□□ -0.95
TCF4-209ENST00000544241 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.09□□□□□ -0.95
TCF4-209ENST00000544241 LINC01553A4QN01 128 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 DHRS7CA6NNS2 312 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 K7EQS6 105 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 SOX15O60248 233 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 LMX1BO60663 402 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 RAD51DO75771 328 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 CDS2O95674 445 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 BGLAPP02818 100 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 CT45A8P0DMV1 189 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 CT45A9P0DMV2 189 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 ADH5P11766 374 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 CEACAM1P13688 526 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 CTGFP29279 349 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 RPL29P47914 159 aaKnown RBP9.09□□□□□ -0.95
TCF4-209ENST00000544241 MTCP1P56278 107 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 PRDX4Q13162 271 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 ZNF77Q15935 545 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 CT45A2Q5DJT8 189 aa9.09□□□□□ -0.95
TCF4-209ENST00000544241 FIGLAQ6QHK4 219 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms