RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 GCSAMQ8N6F7 178 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 C19orf18Q8NEA5 215 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 OR52N4Q8NGI2 321 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 OR5D18Q8NGL1 313 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 OR10Z1Q8NGY1 313 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PHYHIPQ92561 330 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 REG4Q9BYZ8 158 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PKIBQ9C010 78 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 STUB1Q9UNE7 303 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PPIAL4AQ9Y536 164 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 NOTCH2Q04721 2471 aa12.17□□□□□ -0.46
TNFRSF1A-216ENST00000543995 C3orf80F5H4A9 247 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SPRY1O43609 319 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SYNGR1O43759 233 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 LHBP01229 141 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ALDOBP05062 364 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GLRA1P23415 457 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 CALRP27797 417 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ZNF93P35789 620 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 CFHR2P36980 270 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 IL24Q13007 206 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ZMYND11Q15326 602 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 MKXQ8IYA7 352 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 BATF2Q8N1L9 274 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 DEFB108BQ8NET1 73 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GAL3ST1Q99999 423 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PPIL3Q9H2H8 161 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 DNAJB11Q9UBS4 358 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SSR3Q9UNL2 185 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SRRM5B3KS81 715 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 IGHV2-70P01814 119 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 EGR1P18146 543 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 USF1P22415 310 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GALP22466 123 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 MPZP25189 248 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 MDH2P40926 338 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PDZK1IP1Q13113 114 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 C22orf42Q6IC83 251 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 CD200R1LQ6Q8B3 271 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 RNF144BQ7Z419 303 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 MUC20Q8N307 709 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 JAGN1Q8N5M9 183 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 NKAIN3Q8N8D7 197 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PNLDC1Q8NA58 520 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SLAMF9Q96A28 289 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ZNF488Q96MN9 340 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 NKX3-1Q99801 234 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 FAM192AQ9GZU8 254 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 WDR13Q9H1Z4 485 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 OR51E2Q9H255 320 aa12.16□□□□□ -0.46
TNFRSF1A-216ENST00000543995 IGHV3OR15-7A0A075B7D8 119 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TRAV38-1A0A0B4J264 116 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 IGHV4-61A0A0C4DH41 118 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 MEGF11A6BM72 1044 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 OOEPA6NGQ2 149 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TRAPPC2LH3BP13 241 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 LGALS8O00214 317 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 WNT9BO14905 357 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 ANGPTL7O43827 346 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 NXPH2O95156 264 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TMEM225BP0DP42 221 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GADD45AP24522 165 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 KCNJ8Q15842 424 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SPNS3Q6ZMD2 512 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 POC1AQ8NBT0 407 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 OR51F2Q8NH61 342 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TMIGD2Q96BF3 282 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 CHCHD6Q9BRQ6 235 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SMURF1Q9HCE7 757 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 SNTG1Q9NSN8 517 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 TXNL4BQ9NX01 149 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 PCDHB10Q9UN67 800 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 GSTK1Q9Y2Q3 226 aa12.15□□□□□ -0.46
TNFRSF1A-216ENST00000543995 AKAP9Q99996 3911 aa12.15□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CCDC168Q8NDH2 2452 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 LOC100506127A0A0U1RQW1 187 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 H7C1Q1 480 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SMAD7O15105 426 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 PGA5P0DJD9 388 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 MYL9P24844 172 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 OR3A4PP47883 348 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 MICBQ29980 383 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 TIMM50Q3ZCQ8 353 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ZNF404Q494X3 552 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 TMEM155Q4W5P6 130 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 LRRC28Q86X40 367 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SPICQ8N5J4 248 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 MAPK1IP1LQ8NDC0 245 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 TNFAIP8L1Q8WVP5 186 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SEH1LQ96EE3 360 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CEP19Q96LK0 163 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 S100A13Q99584 98 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ELL3Q9HB65 397 aaPredicted RBP12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 TMEM165Q9HC07 324 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 MTCH1Q9NZJ7 389 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SCOCQ9UIL1 159 aa12.14□□□□□ -0.47
TNFRSF1A-216ENST00000543995 HEXAP06865 529 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 MUC1P15941 1255 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 BCL3P20749 454 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 FGF9P31371 208 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms