RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 FCGR2AP12318 317 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 SNCAP37840 140 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 CARD17Q5XLA6 110 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 SHISA6Q6ZSJ9 500 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 C1QL2Q7Z5L3 287 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 ZNF561Q8N587 486 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 THAP3Q8WTV1 239 aaPredicted RBP12.01□□□□□ -0.49
VPS33A-208ENST00000543633 TMEM54Q969K7 222 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 HIST1H2BAQ96A08 127 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 ANXA10Q9UJ72 324 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 MCTS1Q9ULC4 181 aaKnown RBP12.01□□□□□ -0.49
VPS33A-208ENST00000543633 KCNIP3Q9Y2W7 256 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 RALGAPA1Q6GYQ0 2036 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 A0A1B0GW64 132 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 A0A1W2PNR3 127 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 GPR137BO60478 399 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 OR8U9P0C7N5 309 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 ANOS1P23352 680 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 P2RY1P47900 373 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 CSNK1A1P48729 337 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 IL13RA2Q14627 380 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 UBE2V2Q15819 145 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 NKAIN1Q4KMZ8 207 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 OR8U1Q8NH10 309 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 SMDT1Q9H4I9 107 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 NAA60Q9H7X0 242 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 NECAP2Q9NVZ3 263 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 MYOTQ9UBF9 498 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 MRPS17Q9Y2R5 130 aaKnown RBP12.01□□□□□ -0.49
VPS33A-208ENST00000543633 MUC3AQ02505 3323 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 SEC16AO15027 2179 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 C5orf52A6NGY3 159 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 ZNF814B7Z6K7 855 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 C9JQL5 133 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 H7C1Q1 480 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 DKK1O94907 266 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 AGAP20933 346 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 LMO1P25800 156 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 HGFACQ04756 655 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 ENDOGQ14249 297 aaKnown RBP12□□□□□ -0.49
VPS33A-208ENST00000543633 RHEBQ15382 184 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 RPUSD3Q6P087 351 aaKnown RBP12□□□□□ -0.49
VPS33A-208ENST00000543633 CPEB2Q7Z5Q1 589 aaKnown RBP12□□□□□ -0.49
VPS33A-208ENST00000543633 FAM219AQ8IW50 185 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 LFNGQ8NES3 379 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 OR10G3Q8NGC4 313 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 MAFAQ8NHW3 353 aaPredicted RBP12□□□□□ -0.49
VPS33A-208ENST00000543633 MAFIPQ8WZ33 124 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 MRPL24Q96A35 216 aaKnown RBP12□□□□□ -0.49
VPS33A-208ENST00000543633 INTS12Q96CB8 462 aaKnown RBP12□□□□□ -0.49
VPS33A-208ENST00000543633 MALSU1Q96EH3 234 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 C14orf79Q96F83 325 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 PLEKHJ1Q9NW61 149 aa12□□□□□ -0.49
VPS33A-208ENST00000543633 C19orf25Q9UFG5 118 aaPredicted RBP12□□□□□ -0.49
VPS33A-208ENST00000543633 E9PLN8 166 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 VAMP5O95183 116 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 OR5H8P0DN80 308 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 TMEM187Q14656 261 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 OR5D18Q8NGL1 313 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 C2CD4CQ8TF44 421 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 NABP1Q96AH0 204 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 SPACA9Q96E40 222 aaPredicted RBP11.99□□□□□ -0.49
VPS33A-208ENST00000543633 LIN37Q96GY3 246 aaPredicted RBP11.99□□□□□ -0.49
VPS33A-208ENST00000543633 AKR1E2Q96JD6 320 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 SCRT1Q9BWW7 348 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 ANGPTL4Q9BY76 406 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 METTL9Q9H1A3 318 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 LSM5Q9Y4Y9 91 aaKnown RBP11.99□□□□□ -0.49
VPS33A-208ENST00000543633 DNAH14Q0VDD8 3507 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 IGKV1D-8A0A087WSZ0 117 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 EIF1BO60739 113 aaKnown RBP11.99□□□□□ -0.49
VPS33A-208ENST00000543633 EIF3GO75821 320 aaKnown RBP eCLIP11.99□□□□□ -0.49
VPS33A-208ENST00000543633 GLAP06280 429 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 ACAA1P09110 424 aaPredicted RBP11.99□□□□□ -0.49
VPS33A-208ENST00000543633 FAHP16930 419 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 GLP1RP43220 463 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 UCP3P55916 312 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 CLDN17P56750 224 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 H3F3AP84243 136 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 GUK1Q16774 197 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 FOXRED2Q8IWF2 684 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 DEFB119Q8N690 84 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 SPTSSAQ969W0 71 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 PIGQQ9BRB3 760 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 PBDC1Q9BVG4 233 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 RGCCQ9H4X1 137 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 METTL1Q9UBP6 276 aaKnown RBP11.99□□□□□ -0.49
VPS33A-208ENST00000543633 PIGLQ9Y2B2 252 aa11.99□□□□□ -0.49
VPS33A-208ENST00000543633 M0R135 149 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 MBPP02686 304 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-208ENST00000543633 S100A9P06702 114 aaKnown RBP11.98□□□□□ -0.49
VPS33A-208ENST00000543633 ZNF728P0DKX0 622 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 RAB1AP62820 205 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 CNN3Q15417 329 aaKnown RBP11.98□□□□□ -0.49
VPS33A-208ENST00000543633 TMEM176BQ3YBM2 270 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-208ENST00000543633 AWAT1Q58HT5 328 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 FAM69BQ5VUD6 431 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 ASCL4Q6XD76 172 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 C6orf201Q7Z4U5 140 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms