RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PLA2G12AQ9BZM1 189 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SCN3AQ9NY46 2000 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 ANGPTL7O43827 346 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 CD96P40200 585 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SORDQ00796 357 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 CD226Q15762 336 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 MOB3BQ86TA1 216 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SIAH3Q8IW03 269 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 OR6X1Q8NH79 312 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 CMTM2Q8TAZ6 248 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 MBD3L1Q8WWY6 194 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 UHRF2Q96PU4 802 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 DOK1Q99704 481 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF2Q9BSG1 426 aaPredicted RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 NIT2Q9NQR4 276 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 PLSCR4Q9NRQ2 329 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SIRT3Q9NTG7 399 aaPredicted RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 RBFOX1Q9NWB1 397 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM30CPA0ZSE6 113 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 PLPP3O14495 311 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 SPRY1O43609 319 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 EPPINO95925 133 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 CRHP06850 196 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 HOXD4P09016 255 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 ANKRD34CP0C6C1 535 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 CEACAM1P13688 526 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 COX6B1P14854 86 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 AADACP22760 399 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 CAMPP49913 170 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 ARL16Q0P5N6 197 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 RSPO4Q2I0M5 234 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 TSEN54Q7Z6J9 526 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 C17orf78Q8N4C9 275 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 FAM181AQ8N9Y4 354 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 OR13C5Q8NGS8 318 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 TTTY12Q9BZ98 90 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 LIN7CQ9NUP9 197 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 BOLA1Q9Y3E2 137 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 ADAP1O75689 374 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 GLI4P10075 376 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 LIFP15018 202 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 PEBP1P30086 187 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 RELBQ01201 579 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 STAC2Q6ZMT1 411 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM217Q8N7C4 229 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 SIRT5Q9NXA8 310 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 NTMQ9P121 344 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 MRPS18BQ9Y676 258 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 IFITM5A6NNB3 132 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 HRKO00198 91 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 ZIC2O95409 532 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 PATE4P0C8F1 98 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 MPGP29372 298 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 P2RX3P56373 397 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 MRPS34P82930 218 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 ERHP84090 104 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 SNTB1Q13884 538 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 OR10K2Q6IF99 312 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 Q6ZRG5 221 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 MOB1BQ7L9L4 216 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 SSX8Q7RTT4 187 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 UBE3DQ7Z6J8 389 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 UBAC2Q8NBM4 344 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 GPR32P1Q8NGA4 272 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 RPEQ96AT9 228 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 DUS3LQ96G46 650 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 LIN37Q96GY3 246 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 PLAC1Q9HBJ0 212 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 ISYNA1Q9NPH2 558 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 FLVCR1Q9Y5Y0 555 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 MN1Q10571 1320 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 NCBP2LA6PVI3 153 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 NXPH3O95157 252 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 PMS2P2O95744 297 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF883P0CG24 379 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 CCL2P13500 99 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 TBPP20226 339 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 DUSP1P28562 367 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 RPS19P39019 145 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 CD81P60033 236 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 SKP2Q13309 424 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 CLINT1Q14677 625 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 OR8G2PQ6IF36 304 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF529Q6P280 563 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 C19orf48Q6RUI8 117 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 SEZ6L2Q6UXD5 910 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM179BQ7Z7N9 219 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 OR51S1Q8NGJ8 323 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 LRRC29Q8WV35 223 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 NUDCD2Q8WVJ2 157 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 CMBLQ96DG6 245 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 NDUFB11Q9NX14 153 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 ABCA7Q8IZY2 2146 aa6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 TDRD6O60522 2096 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-206ENST00000543397 F6UZH7 168 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 OR5H8P0DN80 308 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF266Q14584 549 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF385CQ66K41 422 aaPredicted RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 GTF2H5Q6ZYL4 71 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 C9orf40Q8IXQ3 194 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms