RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 UNKLQ9H9P5 680 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-215ENST00000543359 RASL12Q9NYN1 266 aa10.76□□□□□ -0.69
TNFRSF1A-215ENST00000543359 SLC25A10Q9UBX3 287 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF1A-215ENST00000543359 FAM181BA6NEQ2 426 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ENTPD6O75354 484 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 KRT8P05787 483 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ERVK11-1P61568 191 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 SNRPGP62308 76 aaKnown RBP10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 HCP5Q6MZN7 132 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 LDLRAD3Q86YD5 345 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ZNF573Q86YE8 665 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 CALHM1Q8IU99 346 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 YIPF7Q8N8F6 280 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 OR10H4Q8NGA5 316 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 TMIGD2Q96BF3 282 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 NRIP2Q9BQI9 281 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 HES4Q9HCC6 221 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ONECUT1Q9UBC0 465 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 GTF2A1LQ9UNN4 478 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 MMP24Q9Y5R2 645 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 POMT1Q9Y6A1 747 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 WNK1Q9H4A3 2382 aa10.75□□□□□ -0.69
TNFRSF1A-215ENST00000543359 IGKV1-27A0A075B6S5 117 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 NKX6-3A6NJ46 265 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 RFPL4AA6NLU0 287 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 RFPL4AL1F8VTS6 287 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 J3QT63 122 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 EI24O14681 340 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 IGHV4-59P01825 116 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 GABRB1P18505 474 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 MDKP21741 143 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 OMGP23515 440 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 KIR3DL2P43630 455 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 IER3P46695 156 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 HAAOP46952 286 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 GABRA2P47869 451 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ALDH3A2P51648 485 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 CDC42P60953 191 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 UBE2V2Q15819 145 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 C11orf42Q8N5U0 333 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 SGMS2Q8NHU3 365 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 RFKQ969G6 155 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ELL3Q9HB65 397 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 SIRT7Q9NRC8 400 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 C1RLQ9NZP8 487 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 AASSQ9UDR5 926 aa10.74□□□□□ -0.69
TNFRSF1A-215ENST00000543359 TRBV23-1A0A0A0MS06 115 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ANKRD61A6NGH8 418 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 POM121CA8CG34 1229 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 F8VVB4 439 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 F8VWA3 439 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 M0R1W7 72 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 NDUFB7P17568 137 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 PRDX2P32119 198 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 OCLNQ16625 522 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ODF4Q2M2E3 257 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ZIK1Q3SY52 487 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 TP53I3Q53FA7 332 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ZFP1Q6P2D0 407 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 FIP1L1Q6UN15 594 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 SHISA2Q6UWI4 295 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 CCDC121Q6ZUS5 278 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ANGPTL5Q86XS5 388 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 CMTM4Q8IZR5 234 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 RDH10Q8IZV5 341 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 CBR4Q8N4T8 237 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 NPRL2Q8WTW4 380 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 SSMEM1Q8WWF3 244 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 H1FXQ92522 213 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 MBOAT4Q96T53 435 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 SLC29A1Q99808 456 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 PKIBQ9C010 78 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 TNFRSF19Q9NS68 423 aa10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.73□□□□□ -0.69
TNFRSF1A-215ENST00000543359 H3BSH0 61 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 SYT7O43581 403 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 NDUFA7O95182 113 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 CEBPDP49716 269 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 UBE2E1P51965 193 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 NANOS3P60323 173 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 KLRD1Q13241 179 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 SMIM21Q3B7S5 101 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 PRR31Q5SQ13 230 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 FDX2Q6P4F2 183 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 PNKDQ8N490 385 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 CCDC54Q8NEL0 328 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 TMEM185AQ8NFB2 350 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 OR2G2Q8NGZ5 317 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 RNFT2Q96EX2 444 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 ZNF649Q9BS31 505 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 CHST5Q9GZS9 411 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 SLITRK2Q9H156 845 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 METTL8Q9H825 291 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 C19orf12Q9NSK7 152 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 MTCH1Q9NZJ7 389 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 EXOGQ9Y2C4 368 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 DSCAML1Q8TD84 2053 aa10.72□□□□□ -0.69
TNFRSF1A-215ENST00000543359 IGKV1-9A0A0C4DH69 117 aa10.71□□□□□ -0.69
TNFRSF1A-215ENST00000543359 NPFFO15130 113 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms