RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	NFYA	P23511	347 aa	Predicted RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	ARR3	P36575	388 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	SERPINF1	P36955	418 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	CCR9	P51686	369 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	AP3S2	P59780	193 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	SEC61A1	P61619	476 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	RPS27A	P62979	156 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	MRPS10	P82664	201 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	GGTLC2	Q14390	218 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	RAB35	Q15286	201 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	ZMYND11	Q15326	602 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	MPPED2	Q15777	294 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	HFE	Q30201	348 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	IDNK	Q5T6J7	187 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	ZNF626	Q68DY1	528 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	KLHL24	Q6TFL4	600 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	TMUB2	Q71RG4	321 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	MEPCE	Q7L2J0	689 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	HIST3H2A	Q7L7L0	130 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	BCDIN3D	Q7Z5W3	292 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	MDP1	Q86V88	176 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	RANBP3L	Q86VV4	465 aa	Predicted RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	NR2C2AP	Q86WQ0	139 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	RBM45	Q8IUH3	476 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	ZNF584	Q8IVC4	421 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	GID4	Q8IVV7	300 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	UEVLD	Q8IX04	471 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	IQCF1	Q8N6M8	205 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	SAMD12	Q8N8I0	201 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	OR4K5	Q8NGD3	323 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	OR5J2	Q8NH18	312 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	OR6X1	Q8NH79	312 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	TRMT10A	Q8TBZ6	339 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	SLC7A13	Q8TCU3	470 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	PCNP	Q8WW12	178 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	SPRYD4	Q8WW59	207 aa	Predicted RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	NSMAF	Q92636	917 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	HIST1H2AC	Q93077	130 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	TMEM54	Q969K7	222 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	C12orf57	Q99622	126 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	CITED1	Q99966	193 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	MRI1	Q9BV20	369 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	TMED9	Q9BVK6	235 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	TEX12	Q9BXU0	123 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	CACYBP	Q9HB71	228 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	GPN1	Q9HCN4	374 aa	Predicted RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	MEPE	Q9NQ76	525 aa	Predicted RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	BIN3	Q9NQY0	253 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	MAN2C1	Q9NTJ4	1040 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	TAS2R5	Q9NYW4	299 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	RHCG	Q9UBD6	479 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	ATP23	Q9Y6H3	246 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	IGHV4-61	A0A0C4DH41	118 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	LOC390937	A0A1W2PQ73	354 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	TMEM82	A0PJX8	343 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	SMIM30	A4D0T7	59 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	TRAPPC13	A5PLN9	417 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	PCP4L1	A6NKN8	68 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	SLC22A31	A6NKX4	558 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	ANXA2P2	A6NMY6	339 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	TEX46	H3BTG2	121 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324		H7C2Y5	167 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	LCE2B	O14633	110 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	SURF4	O15260	269 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	CREBL2	O60519	120 aa	Predicted RBP	5.46	□□□□□ -1.54
CIT-213	ENST00000543324	SERPINA3	P01011	423 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	ALDOB	P05062	364 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	TACSTD2	P09758	323 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	OR4A8	P0C604	315 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	RPA2	P15927	270 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	THBS4	P35443	961 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	SRP9	P49458	86 aa	Known RBP	5.46	□□□□□ -1.54
CIT-213	ENST00000543324	MEOX2	P50222	304 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	IDH3G	P51553	393 aa	Predicted RBP	5.46	□□□□□ -1.54
CIT-213	ENST00000543324	UBE2N	P61088	152 aa	Known RBP	5.46	□□□□□ -1.54
CIT-213	ENST00000543324	POLR2G	P62487	172 aa	Known RBP eCLIP	5.46	□□□□□ -1.54
CIT-213	ENST00000543324	SNTB2	Q13425	540 aa	Known RBP	5.46	□□□□□ -1.54
CIT-213	ENST00000543324	MADCAM1	Q13477	382 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	FHL1	Q13642	323 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	NRN1L	Q496H8	165 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	UBE2NL	Q5JXB2	153 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	DHRS7B	Q6IAN0	325 aa	Predicted RBP	5.46	□□□□□ -1.54
CIT-213	ENST00000543324	ASPHD2	Q6ICH7	369 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	LIN54	Q6MZP7	749 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	GSG1L	Q6UXU4	331 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	TMEM17	Q86X19	198 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	GPR137C	Q8N3F9	429 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	PXT1	Q8NFP0	134 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	OR1M1	Q8NGA1	313 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	OR4D10	Q8NGI6	311 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	FGFBP3	Q8TAT2	258 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	C15orf40	Q8WUR7	153 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	WFDC12	Q8WWY7	111 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	PHYHIP	Q92561	330 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	FBXO17	Q96EF6	278 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	MCHR1	Q99705	422 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	FOXB1	Q99853	325 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	EMC6	Q9BV81	110 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	FNDC11	Q9BVV2	318 aa		5.46	□□□□□ -1.54
CIT-213	ENST00000543324	MRPL13	Q9BYD1	178 aa	Known RBP	5.46	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms