RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 EGR3Q06889 387 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 SRSF4Q08170 494 aaKnown RBP10.74□□□□□ -0.69
RTN3-212ENST00000543123 NXNL2Q5VZ03 156 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 ACP7Q6ZNF0 438 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 Q6ZSV7 163 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 SLC35F2Q8IXU6 374 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 ZNRF1Q8ND25 227 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 BEND2Q8NDZ0 799 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 OR51G2Q8NGK0 314 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 TNFRSF14Q92956 283 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 HEXA-AS1Q9H8Q6 139 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 PLEKHA1Q9HB21 404 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 RAB18Q9NP72 206 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 CLN6Q9NWW5 311 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 ZNF222Q9UK12 451 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 SNX5Q9Y5X3 404 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 R4GMQ9 66 aa10.74□□□□□ -0.69
RTN3-212ENST00000543123 G3V2T6 193 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 TSPAN9O75954 239 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 NXPH2O95156 264 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 TTRP02766 147 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 PGA5P0DJD9 388 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 RASSF2P50749 326 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 DAPP51397 102 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 RPL31P62899 125 aaKnown RBP10.73□□□□□ -0.69
RTN3-212ENST00000543123 MFGE8Q08431 387 aaPredicted RBP10.73□□□□□ -0.69
RTN3-212ENST00000543123 AANATQ16613 207 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 C2orf68Q2NKX9 166 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 PDLIM3Q53GG5 364 aaPredicted RBP10.73□□□□□ -0.69
RTN3-212ENST00000543123 SLX4IPQ5VYV7 408 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 C11orf88Q6PI97 169 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 ZDHHC13Q8IUH4 622 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 ELMOD2Q8IZ81 293 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 TMEM163Q8TC26 289 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 UTP4Q969X6 686 aaKnown RBP10.73□□□□□ -0.69
RTN3-212ENST00000543123 RBM4BQ9BQ04 359 aaKnown RBP10.73□□□□□ -0.69
RTN3-212ENST00000543123 TTTY10Q9BZA0 68 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 USE1Q9NZ43 259 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 OR52A1Q9UKL2 312 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 COPS3Q9UNS2 423 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 MAB21L2Q9Y586 359 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 NOTCH1P46531 2555 aa10.73□□□□□ -0.69
RTN3-212ENST00000543123 RFPL4AA6NLU0 287 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 ZAR1LA6NP61 321 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 RFPL4AL1F8VTS6 287 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 NOS1APO75052 506 aaPredicted RBP10.72□□□□□ -0.69
RTN3-212ENST00000543123 TFF1P04155 84 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 KRT8P05787 483 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 FCGR1AP12314 374 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 GABRA5P31644 462 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 PRDX2P32119 198 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 PRB3Q04118 309 aaPredicted RBP10.72□□□□□ -0.69
RTN3-212ENST00000543123 ATP6AP1Q15904 470 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 TMEM42Q69YG0 159 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 ASPHD2Q6ICH7 369 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 LIAT1Q6ZQX7 453 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 TCEANCQ8N8B7 351 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 CCDC54Q8NEL0 328 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 OR4C13Q8NGP0 309 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 SLC7A6OSQ96CW6 309 aaPredicted RBP10.72□□□□□ -0.69
RTN3-212ENST00000543123 NRIP2Q9BQI9 281 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 PPA2Q9H2U2 334 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 ELL3Q9HB65 397 aaPredicted RBP10.72□□□□□ -0.69
RTN3-212ENST00000543123 ADGRL4Q9HBW9 690 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 SLC7A11Q9UPY5 501 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 V9GYS6 101 aa10.72□□□□□ -0.69
RTN3-212ENST00000543123 PQLC2LA1A4F0 135 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 PRR32B1ATL7 298 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 H3BUX3 64 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 SRSF10O75494 262 aaKnown RBP10.71□□□□□ -0.69
RTN3-212ENST00000543123 FASP25445 335 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 DLX1P56177 255 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 LGALS4P56470 323 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 ERVFRD-1P60508 538 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 LRRC75BQ2VPJ9 315 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 AADACL4Q5VUY2 407 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 C12orf73Q69YU5 71 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 ASRGL1Q7L266 308 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 CALHM1Q8IU99 346 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 PNKDQ8N490 385 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 SSX3Q99909 188 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 APOL4Q9BPW4 351 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 PKIBQ9C010 78 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 GABARAPL1Q9H0R8 117 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 GPR173Q9NS66 373 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 C19orf12Q9NSK7 152 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 FBLN5Q9UBX5 448 aa10.71□□□□□ -0.69
RTN3-212ENST00000543123 WARS2Q9UGM6 360 aaKnown RBP10.71□□□□□ -0.69
RTN3-212ENST00000543123 WNK1Q9H4A3 2382 aa10.7□□□□□ -0.7
RTN3-212ENST00000543123 SYNGR1O43759 233 aa10.7□□□□□ -0.7
RTN3-212ENST00000543123 GATBO75879 557 aaKnown RBP10.7□□□□□ -0.7
RTN3-212ENST00000543123 OR2T7P0C7T2 308 aa10.7□□□□□ -0.7
RTN3-212ENST00000543123 CCL1P22362 96 aa10.7□□□□□ -0.7
RTN3-212ENST00000543123 MPZP25189 248 aa10.7□□□□□ -0.7
RTN3-212ENST00000543123 IL24Q13007 206 aa10.7□□□□□ -0.7
RTN3-212ENST00000543123 DMRTC1Q5HYR2 192 aa10.7□□□□□ -0.7
RTN3-212ENST00000543123 KDM4DQ6B0I6 523 aa10.7□□□□□ -0.7
RTN3-212ENST00000543123 Q6ZTK2 550 aa10.7□□□□□ -0.7
RTN3-212ENST00000543123 CD177Q8N6Q3 437 aa10.7□□□□□ -0.7
RTN3-212ENST00000543123 YIPF7Q8N8F6 280 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms