RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 NWD1Q149M9 1564 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 DLG5Q8TDM6 1919 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 RICTORQ6R327 1708 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 SIGLEC1Q9BZZ2 1709 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 IGLV4-60A0A075B6I1 120 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 TRAV26-1A0A087WT03 109 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 TMEM213A2RRL7 107 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 RAMP3O60896 148 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 DCTN3O75935 186 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 IFNA5P01569 189 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 TCRBP04435 133 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 RPN2P04844 631 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 SERPIND1P05546 499 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 CRYGBP07316 175 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 IFI30P13284 250 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 UGT2B10P36537 528 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 TFDP2Q14188 446 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 SELPLGQ14242 412 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 GRK1Q15835 563 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 SFT2D3Q587I9 215 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 PIGGQ5H8A4 983 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 RNASEKQ6P5S7 137 aaKnown RBP3.42□□□□□ -1.86
YBX3-210ENST00000540975 Q6ZPB1 254 aaPredicted RBP3.42□□□□□ -1.86
YBX3-210ENST00000540975 C6orf120Q7Z4R8 191 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 TGIF2LXQ8IUE1 241 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 NECAP1Q8NC96 275 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 FBXO36Q8NEA4 188 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 OR5H6Q8NGV6 325 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 OR11L1Q8NGX0 322 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 C10orf82Q8WW14 230 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 DNAJB3Q8WWF6 145 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 NDRG1Q92597 394 aaKnown RBP3.42□□□□□ -1.86
YBX3-210ENST00000540975 CDS1Q92903 461 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 DCPSQ96C86 337 aaKnown RBP3.42□□□□□ -1.86
YBX3-210ENST00000540975 L3HYPDHQ96EM0 354 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 TIMD4Q96H15 378 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 RNF2Q99496 336 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 MND1Q9BWT6 205 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 EML4Q9HC35 981 aaKnown RBP3.42□□□□□ -1.86
YBX3-210ENST00000540975 HRASLSQ9HDD0 168 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 DYRK4Q9NR20 520 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 SLC2A8Q9NY64 477 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 RSL24D1Q9UHA3 163 aaKnown RBP3.42□□□□□ -1.86
YBX3-210ENST00000540975 PHF11Q9UIL8 331 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 OR52A1Q9UKL2 312 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 TFR2Q9UP52 801 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 POLR3HQ9Y535 204 aaPredicted RBP3.42□□□□□ -1.86
YBX3-210ENST00000540975 TSSC4Q9Y5U2 329 aaPredicted RBP3.42□□□□□ -1.86
YBX3-210ENST00000540975 ZNF142P52746 1687 aaPredicted RBP3.42□□□□□ -1.86
YBX3-210ENST00000540975 RIMS1Q86UR5 1692 aaKnown RBP3.42□□□□□ -1.86
YBX3-210ENST00000540975 MYH8P13535 1937 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 MYH2Q9UKX2 1941 aa3.42□□□□□ -1.86
YBX3-210ENST00000540975 RIMBP3Q9UFD9 1639 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 LRP4O75096 1905 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 FAM25AB3EWG3 89 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 FAM25CB3EWG5 89 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 FAM25GB3EWG6 89 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 E7EWF7 191 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 G3V4G9 280 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 GOSR2O14653 212 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 DLEU1O43261 78 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 TM7SF2O76062 418 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 OR2F2O95006 317 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 H6PDO95479 791 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 CYB5R3P00387 301 aaPredicted RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 IFNA21P01568 189 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 FGGP02679 453 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 H2BFMP0C1H6 154 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 KCNE1P15382 129 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 TAC1P20366 129 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 BGNP21810 368 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 HTR2AP28223 471 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 ERP29P30040 261 aaKnown RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 HPCAL1P37235 193 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 COILP38432 576 aaPredicted RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 CEACAM6P40199 344 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 AQP2P41181 271 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 PTGDSP41222 190 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 KIR2DS4P43632 304 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 CYB561P49447 251 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 DAP3P51398 398 aaKnown RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 CRISP3P54108 245 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 FGL1Q08830 312 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 ATP6AP1Q15904 470 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 AKIRIN2Q53H80 203 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 CTSL3PQ5NE16 218 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 FAM71F2Q6NXP2 309 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 PRSS41Q7RTY9 318 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 CROCCP2Q86T23 111 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 THOC6Q86W42 341 aaKnown RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 CALHM1Q8IU99 346 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 FTMTQ8N4E7 242 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 NPBQ8NG41 125 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 TRMT10AQ8TBZ6 339 aaKnown RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 C16orf78Q8WTQ4 265 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 SMARCD2Q92925 531 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 PPWD1Q96BP3 646 aaKnown RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 TM4SF19Q96DZ7 209 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 C14orf144Q96I85 54 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 DOK1Q99704 481 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms