RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ZNF254O75437 659 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 CST1P01037 141 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 OSMP13725 252 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 HOXB6P17509 224 aaKnown RBP9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 PRDX2P32119 198 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 BMXP51813 675 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 RPS7P62081 194 aaKnown RBP9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 MS4A2Q01362 244 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 ROM1Q03395 351 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 ZNF829Q3KNS6 432 aaPredicted RBP9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 ZNF684Q5T5D7 378 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 PLCXD3Q63HM9 321 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 PIGWQ7Z7B1 504 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 COMMD2Q86X83 199 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 NDUFA11Q86Y39 141 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 ZNF679Q8IYX0 411 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 CD177Q8N6Q3 437 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 OR4F17Q8NGA8 305 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 OR2T27Q8NH04 317 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 ASB17Q8WXJ9 295 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 FOXRED1Q96CU9 486 aaPredicted RBP9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 ASB9Q96DX5 294 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 OR4F4Q96R69 305 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 CHID1Q9BWS9 393 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 TEX12Q9BXU0 123 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 C1orf21Q9H246 121 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 ZNF702PQ9H963 129 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 GPR84Q9NQS5 396 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 SERTAD4Q9NUC0 356 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 NUFIP1Q9UHK0 495 aaKnown RBP9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 PITPNC1Q9UKF7 332 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 TCF19Q9Y242 345 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 PIGLQ9Y2B2 252 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 TMEM14AQ9Y6G1 99 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 C17orf98A8MV24 154 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 DHRS3O75911 302 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 ALX3O95076 343 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 NRASP01111 189 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 RBP4P02753 201 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 TK1P04183 234 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 CCL3L1P16619 93 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 FAHP16930 419 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 COX7A1P24310 79 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 PAX6P26367 422 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 HAAOP46952 286 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 CNN3Q15417 329 aaKnown RBP9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 TMEM42Q69YG0 159 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 OR51E1Q8TCB6 317 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 RPS4Y2Q8TD47 263 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 WIPF2Q8TF74 440 aaPredicted RBP9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 MALSU1Q96EH3 234 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 LRGUKQ96M69 825 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 OR8B4Q96RC9 309 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 TEAD3Q99594 435 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 NRIP2Q9BQI9 281 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 MOB1AQ9H8S9 216 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 ZNF556Q9HAH1 456 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 SLC25A19Q9HC21 320 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 HES4Q9HCC6 221 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 NECAP2Q9NVZ3 263 aa9.71□□□□□ -0.86
CBX3P4-202ENST00000540428 A6NDX4 124 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 DHRS7CA6NNS2 312 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 ODF3BA8MYP8 253 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 DLGAP1O14490 977 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 GNGT2O14610 69 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 SYNGR1O43759 233 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 E2F6O75461 281 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 NXPH2O95156 264 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 PRB2P02812 416 aaPredicted RBP9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 ANXA8P13928 327 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 MPZP25189 248 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 DYNLT3P51808 116 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 RIDAP52758 137 aaKnown RBP9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 HCCSP53701 268 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 DLX6P56179 175 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 LOXL3P58215 753 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 APOFQ13790 326 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 ZNF273Q14593 569 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 NSUN5P1Q3KNT7 163 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 DMRTC1Q5HYR2 192 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 CLVS2Q5SYC1 327 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 HIST2H2BDQ6DRA6 164 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 LHFPL4Q7Z7J7 247 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 ADGRG5Q8IZF4 528 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 BBS1Q8NFJ9 593 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 OR11H6Q8NGC7 330 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 OR4M1Q8NGD0 313 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 OR13D1Q8NGV5 346 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 MRAPQ8TCY5 172 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 NSL1Q96IY1 281 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 ZNF488Q96MN9 340 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 NKX3-1Q99801 234 aaPredicted RBP9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 PRSS22Q9GZN4 317 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 WNT10AQ9GZT5 417 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 ABCB10Q9NRK6 738 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 TAS2R1Q9NYW7 299 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 PLXNB1O43157 2135 aa9.7□□□□□ -0.86
CBX3P4-202ENST00000540428 PQLC2LA1A4F0 135 aa9.69□□□□□ -0.86
CBX3P4-202ENST00000540428 K7N7A8 449 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms