RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SLC35E1Q96K37 410 aa8.37□□□□□ -1.07
CTNNA1-243ENST00000540387 C20orf144Q9BQM9 153 aa8.37□□□□□ -1.07
CTNNA1-243ENST00000540387 COMMD4Q9H0A8 199 aa8.37□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF443Q9Y2A4 671 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-243ENST00000540387 MRPS2Q9Y399 296 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF705FA8MVS1 300 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 PNPP00491 289 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 IFNA6P05013 189 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF705DP0CH99 300 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF705BP0CI00 300 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 SLC6A6P31641 620 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 WNT5AP41221 380 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ELOA3BQ3SY89 546 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 PRAMEF14Q5SWL7 426 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF880Q6PDB4 577 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 FAM220AQ7Z4H9 259 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 P4HA3Q7Z4N8 544 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 HOGA1Q86XE5 327 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 C9orf40Q8IXQ3 194 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF595Q8IYB9 648 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEM156Q8N614 296 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF676Q8N7Q3 588 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 PLPP7Q8NBV4 271 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 SLC26A10Q8NG04 563 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ELOA3Q8NG57 546 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 CCL4L1Q8NHW4 92 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 MCHR2Q969V1 340 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 KLHDC7BQ96G42 594 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 NUDT11Q96G61 164 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 TBX15Q96SF7 602 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ANGPTL4Q9BY76 406 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 SRD5A3Q9H8P0 318 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ADAP2Q9NPF8 381 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 SERTAD3Q9UJW9 196 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 PPIAL4AQ9Y536 164 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 B4DEV8 164 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ETV2O00321 342 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 LYPD3O95274 346 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 TACSTD2P09758 323 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ALDH3B1P43353 468 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 OR3A2P47893 321 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 HLA-DRB3P79483 266 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 PHF19Q5T6S3 580 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF761Q86XN6 746 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 CMTM1Q8IZ96 169 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 NPEPL1Q8NDH3 523 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 SNIP1Q8TAD8 396 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 AQP3Q92482 292 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 ACY3Q96HD9 319 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 CABLES2Q9BTV7 478 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 C5orf66Q9H5L9 145 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 WFDC1Q9HC57 220 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 MRM2Q9UI43 246 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 GTF2A1LQ9UNN4 478 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 RCL1Q9Y2P8 373 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 MED31Q9Y3C7 131 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 LIPGQ9Y5X9 500 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 LAMA1P25391 3075 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 EML5Q05BV3 1969 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 BORCS7-ASMTA0A0B4J1R7 106 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 SPTY2D1-AS1A0A0U1RR47 76 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 K7N7A8 449 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 M0QZ24 198 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 CD38P28907 300 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 SUPT4H1P63272 117 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 UBE2V1Q13404 147 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 OR1Q1Q15612 314 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEM241Q24JQ0 296 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 OGFOD3Q6PK18 319 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEM182Q6ZP80 229 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 DTWD2Q8NBA8 298 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 THAP3Q8WTV1 239 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 PRRX2Q99811 253 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 TRIM2Q9C040 744 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 GPR35Q9HC97 309 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEM242Q9NWH2 141 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 KLHDC2Q9Y2U9 406 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 MEMO1Q9Y316 297 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 WSB1Q9Y6I7 421 aa8.36□□□□□ -1.07
CTNNA1-243ENST00000540387 MYO15AQ9UKN7 3530 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 A0A1W2PR77 199 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 GLOD5A6NK44 160 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 TNFRSF10CO14798 259 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 TNFSF13O75888 250 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 PI3P19957 117 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 BMI1P35226 326 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 FZD2Q14332 565 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 ICAM4Q14773 271 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 ALG10BQ5I7T1 473 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEM64Q6YI46 380 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF66Q6ZN08 573 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 LINC01555Q8NAE3 123 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 STT3BQ8TCJ2 826 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 CORO2AQ92828 525 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 UBE2E3Q969T4 207 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 CLUHP3Q96NS8 147 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 TIMM29Q9BSF4 260 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 IER3IP1Q9Y5U9 82 aa8.35□□□□□ -1.07
CTNNA1-243ENST00000540387 CENPVL1A0A0U1RR11 272 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms