RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 AKR1E2Q96JD6 320 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 WDR77Q9BQA1 342 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-209ENST00000539584 NAA60Q9H7X0 242 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 LMAN1LQ9HAT1 526 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 SHISA8B8ZZ34 492 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 H7C1Q1 480 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 TP53I11O14683 189 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 OR8U9P0C7N5 309 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 CNN3Q15417 329 aaKnown RBP11.6□□□□□ -0.55
UBE3B-209ENST00000539584 GUK1Q16774 197 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 EIF2S3LQ2VIR3 472 aaKnown RBP11.6□□□□□ -0.55
UBE3B-209ENST00000539584 OR1J1Q8NGS3 322 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 OR8U1Q8NH10 309 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 C2CD4CQ8TF44 421 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 HIST1H2BAQ96A08 127 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 NTNG2Q96CW9 530 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 SPACA9Q96E40 222 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-209ENST00000539584 RPS10P5Q9NQ39 176 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 METTL1Q9UBP6 276 aaKnown RBP11.6□□□□□ -0.55
UBE3B-209ENST00000539584 ZNF391Q9UJN7 358 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 MCTS1Q9ULC4 181 aaKnown RBP11.6□□□□□ -0.55
UBE3B-209ENST00000539584 PIGLQ9Y2B2 252 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 A0A1W2PNR3 127 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 EIF3GO75821 320 aaKnown RBP eCLIP11.59□□□□□ -0.55
UBE3B-209ENST00000539584 GLAP06280 429 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 ZNF728P0DKX0 622 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 DUSP1P28562 367 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 CLDN17P56750 224 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 PIGPP57054 158 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 TMEM187Q14656 261 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 TMEM176BQ3YBM2 270 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-209ENST00000539584 ABCA11PQ4W5N1 156 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 FAM69BQ5VUD6 431 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 ASCL4Q6XD76 172 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 FOXRED2Q8IWF2 684 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 OR8G5Q8NG78 346 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 OR10G3Q8NGC4 313 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 OR5D18Q8NGL1 313 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 TCEAL3Q969E4 200 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 PIGQQ9BRB3 760 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 ZNF251Q9BRH9 671 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 LSM5Q9Y4Y9 91 aaKnown RBP11.59□□□□□ -0.55
UBE3B-209ENST00000539584 PCDH15Q96QU1 1955 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 SEC16AO15027 2179 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 C9JQL5 133 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 M0R135 149 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 AGPAT2O15120 278 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 PNLIPP16233 465 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 MAS1LP35410 378 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 PPT1P50897 306 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 SRPXP78539 464 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 HGFACQ04756 655 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 ENDOGQ14249 297 aaKnown RBP11.59□□□□□ -0.55
UBE3B-209ENST00000539584 MIDNQ504T8 468 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 LIAT1Q6ZQX7 453 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 C6orf201Q7Z4U5 140 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 LGI3Q8N145 548 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 SECTM1Q8WVN6 248 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 MRPL24Q96A35 216 aaKnown RBP11.59□□□□□ -0.55
UBE3B-209ENST00000539584 ZNF799Q96GE5 643 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 CLCC1Q96S66 551 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 NAA11Q9BSU3 229 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-209ENST00000539584 CRB3Q9BUF7 120 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 UNKLQ9H9P5 680 aaKnown RBP11.59□□□□□ -0.55
UBE3B-209ENST00000539584 ELL3Q9HB65 397 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-209ENST00000539584 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
UBE3B-209ENST00000539584 PLA2G2EQ9NZK7 142 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 TMED3Q9Y3Q3 217 aa11.59□□□□□ -0.55
UBE3B-209ENST00000539584 CDH23Q9H251 3354 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 C7orf77A4D0Y5 90 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 ZNF814B7Z6K7 855 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 F5H5K5 113 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 ST8SIA3O43173 380 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 DKK1O94907 266 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 MBPP02686 304 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-209ENST00000539584 ACAA1P09110 424 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-209ENST00000539584 ZNF44P15621 663 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 FAHP16930 419 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 LMO1P25800 156 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 CAMLGP49069 296 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 SNRPEP62304 92 aaKnown RBP11.58□□□□□ -0.56
UBE3B-209ENST00000539584 SHBQ15464 509 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 OR8B8Q15620 311 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 LURAP1LQ8IV03 231 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 FAM219AQ8IW50 185 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 DEFB119Q8N690 84 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 CCDC71LQ8N9Z2 235 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 RTN4IP1Q8WWV3 396 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-209ENST00000539584 SLC35B3Q9H1N7 401 aa11.58□□□□□ -0.56
UBE3B-209ENST00000539584 ZNF850A8MQ14 1090 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 E9PLN8 166 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 DHHO43323 396 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 OR2J2O76002 312 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 TMEM225BP0DP42 221 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 GABRR1P24046 479 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 MTCP1P56278 107 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 RSU1Q15404 277 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 AWAT1Q58HT5 328 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 FAM27BQ5VT28 67 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 LHFPL2Q6ZUX7 228 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms