RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 A0A1W2PPE2 198 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 MASP2O00187 686 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 FOLR2P14207 255 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 CHAF1BQ13112 559 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 FAM69BQ5VUD6 431 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 DOK3Q7L591 496 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 LRRC18Q8N456 261 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 STT3BQ8TCJ2 826 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 SSC4DQ8WTU2 575 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.77■□□□□ 0.44
TMEM260-203ENST00000539559 FAM221AA4D161 298 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 OR5H15A6NDH6 313 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 ANGPTL7O43827 346 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 RD3LP0DJH9 198 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 CXCL12P48061 93 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 NOVA1P51513 510 aaKnown RBP17.76■□□□□ 0.43
TMEM260-203ENST00000539559 ZNF41P51814 821 aaPredicted RBP17.76■□□□□ 0.43
TMEM260-203ENST00000539559 GUK1Q16774 197 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 RHBDD1Q8TEB9 315 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 MVB12AQ96EY5 273 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 A0A1B0GX78 115 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 FOXI3A8MTJ6 420 aaPredicted RBP17.76■□□□□ 0.43
TMEM260-203ENST00000539559 JTBO76095 146 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 S100A9P06702 114 aaKnown RBP17.76■□□□□ 0.43
TMEM260-203ENST00000539559 DBHP09172 617 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 TMEM225BP0DP42 221 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 SNCAP37840 140 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 FXYD4P59646 89 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 OGFOD3Q6PK18 319 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 SGPP2Q8IWX5 399 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 HSD17B11Q8NBQ5 300 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 OR10G3Q8NGC4 313 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 CD300LFQ8TDQ1 290 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 EGLN1Q9GZT9 426 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 MOB1AQ9H8S9 216 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 PLEKHJ1Q9NW61 149 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 RCL1Q9Y2P8 373 aaKnown RBP17.76■□□□□ 0.43
TMEM260-203ENST00000539559 KPTNQ9Y664 436 aa17.76■□□□□ 0.43
TMEM260-203ENST00000539559 TRBV11-1A0A0K0K1C0 115 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 MBPP02686 304 aaPredicted RBP17.75■□□□□ 0.43
TMEM260-203ENST00000539559 OR13C7P0DN81 318 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 SLC25A47Q6Q0C1 308 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 TMEM156Q8N614 296 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 FAAP24Q9BTP7 215 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 UBE2CO00762 179 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 NAT2P11245 290 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 PLPPR5Q32ZL2 321 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 PHLDA2Q53GA4 152 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 LYZL2Q7Z4W2 148 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 SLC38A9Q8NBW4 561 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 OR6S1Q8NH40 331 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 S100A13Q99584 98 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 SPSB2Q99619 263 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 SCRT1Q9BWW7 348 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 FGF21Q9NSA1 209 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 NXT1Q9UKK6 140 aaKnown RBP17.75■□□□□ 0.43
TMEM260-203ENST00000539559 NPIPB13A6NJU9 1138 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 NPIPB4C9JG80 1138 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 PIGPP57054 158 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 DNASE2BQ8WZ79 361 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 PADI1Q9ULC6 663 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 STARD10Q9Y365 291 aa17.75■□□□□ 0.43
TMEM260-203ENST00000539559 IGHV1OR21-1A0A087WYE8 117 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 A0A1W2PNV4 684 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 PIAS2O75928 621 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 PRH1P02810 166 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 OR5AC1P0C628 307 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 CAMLGP49069 296 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 TMEM176BQ3YBM2 270 aaPredicted RBP17.74■□□□□ 0.43
TMEM260-203ENST00000539559 ZNF160Q9HCG1 818 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 SDHAF3Q9NRP4 125 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 PIGLQ9Y2B2 252 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 SIT1Q9Y3P8 196 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 EXPH5Q8NEV8 1989 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 IFNA21P01568 189 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 ZNF43P17038 809 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 AGAP20933 346 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 AFF3P51826 1226 aaKnown RBP17.74■□□□□ 0.43
TMEM260-203ENST00000539559 NHLH2Q02577 135 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 TAF9Q16594 264 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 NCMAPQ5T1S8 102 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 OPN5Q6U736 354 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 ZMAT5Q9UDW3 170 aaKnown RBP17.74■□□□□ 0.43
TMEM260-203ENST00000539559 MIOXQ9UGB7 285 aa17.74■□□□□ 0.43
TMEM260-203ENST00000539559 SHANK1Q9Y566 2161 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 EML6Q6ZMW3 1958 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 IGHV3-15A0A0B4J1V0 119 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 UMAD1C9J7I0 102 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 K7ESF4 209 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 BCAT2O15382 392 aaPredicted RBP17.73■□□□□ 0.43
TMEM260-203ENST00000539559 SPRY1O43609 319 aaPredicted RBP17.73■□□□□ 0.43
TMEM260-203ENST00000539559 MT-ND4LP03901 98 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 CLDN17P56750 224 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 PDCD1Q15116 288 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 PHYHD1Q5SRE7 291 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 PLXDC2Q6UX71 529 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 ZNF561Q8N587 486 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 TCEAL3Q969E4 200 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 OR8U8P0C7N1 319 aa17.73■□□□□ 0.43
TMEM260-203ENST00000539559 SMIM6P0DI80 62 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms