RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ADGRE4PQ86SQ3 457 aa14.87□□□□□ -0.03
PCDHB17P-201ENST00000539533 MED12LQ86YW9 2145 aa14.87□□□□□ -0.03
PCDHB17P-201ENST00000539533 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
PCDHB17P-201ENST00000539533 TNFSF18Q9UNG2 199 aa14.87□□□□□ -0.03
PCDHB17P-201ENST00000539533 RPL36A-HNRNPH2H7BZ11 118 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 M0R135 149 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 BCL2L11O43521 198 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 OR2F2O95006 317 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 CYB5AP00167 134 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 CD34P28906 385 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 SRSF4Q08170 494 aaKnown RBP14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 OR2F1Q13607 317 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 RAB35Q15286 201 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 HFEQ30201 348 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 LPCAT3Q6P1A2 487 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 P4HA3Q7Z4N8 544 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 ZNF799Q96GE5 643 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 PGAM5Q96HS1 289 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 FAM71F1Q96KD3 344 aaPredicted RBP14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 TRIB1Q96RU8 372 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 TIMM10BQ9Y5J6 103 aa14.86□□□□□ -0.03
PCDHB17P-201ENST00000539533 ZNF736B4DX44 427 aaPredicted RBP14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 H2AFB1P0C5Y9 115 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 SLC25A4P12235 298 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 FSTP19883 344 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 CRYGSP22914 178 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 SPOCK1Q08629 439 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 PLEKHN1Q494U1 663 aaPredicted RBP14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 LIN54Q6MZP7 749 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 C11orf87Q6NUJ2 197 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 TMEM88Q6PEY1 159 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 LURAP1LQ8IV03 231 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 BPIFB2Q8N4F0 458 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 OR1F12Q8NHA8 337 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 VRK1Q99986 396 aaPredicted RBP14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 OR2H1Q9GZK4 316 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 WNT5BQ9H1J7 359 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 CLCF1Q9UBD9 225 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 CGGBP1Q9UFW8 167 aaPredicted RBP14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 FARS2O95363 451 aaKnown RBP14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 CD74P04233 296 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 MMP7P09237 267 aaPredicted RBP14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 ABOP16442 354 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 GNALP38405 381 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 LRRC37A5PQ49AS3 106 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 SCGB2B2Q4G0G5 96 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 GCNT2Q8N0V5 402 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 LINC00469Q8N7U9 141 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 OR13C8Q8NGS7 320 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 SPTSSAQ969W0 71 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 ABHD17AQ96GS6 310 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 ZNF75AQ96N20 296 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 PDCD10Q9BUL8 212 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 ZMAT3Q9HA38 289 aaKnown RBP14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 COMMD9Q9P000 198 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 NOP16Q9Y3C1 178 aaKnown RBP14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 BSNQ9UPA5 3926 aa14.85□□□□□ -0.03
PCDHB17P-201ENST00000539533 GPR31O00270 319 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 HLA-AP01891 365 aaKnown RBP14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 RAB13P51153 203 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 HGFACQ04756 655 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 PMPCAQ10713 525 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 HAGHLQ6PII5 290 aaPredicted RBP14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 BOLLQ8N9W6 283 aaKnown RBP14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 TMEM185AQ8NFB2 350 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 SARAFQ96BY9 339 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 LYZL4Q96KX0 146 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 SLC6A7Q99884 636 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 ZNF471Q9BX82 626 aaPredicted RBP14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 LHX6Q9UPM6 363 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 DOCK7Q96N67 2140 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 ARHGAP21Q5T5U3 1957 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 SVILO95425 2214 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 CACNA1GO43497 2377 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 OR6C6A6NF89 314 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 DISC1C4P0D8 188 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 MKRN2OSH3BPM6 223 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 CCSO14618 274 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 APOC1P02654 83 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 FCGR2AP12318 317 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 MEOX2P50222 304 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 PCBD1P61457 104 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 NRN1LQ496H8 165 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 OR2W3Q7Z3T1 314 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 SEC22AQ96IW7 307 aa14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 TSNAXQ99598 290 aaKnown RBP14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 ZNF107Q9UII5 783 aaPredicted RBP14.84□□□□□ -0.03
PCDHB17P-201ENST00000539533 RNF222A6NCQ9 220 aa14.83□□□□□ -0.03
PCDHB17P-201ENST00000539533 ATG12O94817 140 aa14.83□□□□□ -0.03
PCDHB17P-201ENST00000539533 HTR5AP47898 357 aa14.83□□□□□ -0.03
PCDHB17P-201ENST00000539533 SNAI3Q3KNW1 292 aa14.83□□□□□ -0.03
PCDHB17P-201ENST00000539533 MOGAT2Q3SYC2 334 aa14.83□□□□□ -0.03
PCDHB17P-201ENST00000539533 BEX5Q5H9J7 111 aa14.83□□□□□ -0.03
PCDHB17P-201ENST00000539533 PHYHIPLQ96FC7 376 aa14.83□□□□□ -0.03
PCDHB17P-201ENST00000539533 GMPPAQ96IJ6 420 aaPredicted RBP14.83□□□□□ -0.03
PCDHB17P-201ENST00000539533 MYEF2Q9P2K5 600 aaKnown RBP14.83□□□□□ -0.03
PCDHB17P-201ENST00000539533 ZNF503-AS2A6NEH8 195 aa14.83□□□□□ -0.04
PCDHB17P-201ENST00000539533 LDLRAD4O15165 306 aa14.83□□□□□ -0.04
PCDHB17P-201ENST00000539533 HLA-HP01893 362 aa14.83□□□□□ -0.04
PCDHB17P-201ENST00000539533 CSN2P05814 226 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms