RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 LHX9Q9NQ69 397 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
CACNB1-206ENST00000539338 PRSS12P56730 875 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 FZD5Q13467 585 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 UQCC2Q9BRT2 126 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 ATG2BQ96BY7 2078 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 ONECUT2O95948 504 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 PNLIPP16233 465 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 PTGFRP43088 359 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 RAB1AP62820 205 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 B3GNTL1Q67FW5 361 aaPredicted RBP12.93□□□□□ -0.34
CACNB1-206ENST00000539338 ZNF774Q6NX45 483 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 FAAP24Q9BTP7 215 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 COL25A1Q9BXS0 654 aaPredicted RBP12.93□□□□□ -0.34
CACNB1-206ENST00000539338 EPOPA6NHQ4 379 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 CDX4O14627 284 aaPredicted RBP12.93□□□□□ -0.34
CACNB1-206ENST00000539338 ABCD4O14678 606 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 SLC6A1P30531 599 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 SELENOPP49908 381 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 LIMK1P53667 647 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 AARDQ4LEZ3 155 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 SLC35E1Q96K37 410 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 ACTR3CQ9C0K3 210 aaPredicted RBP12.93□□□□□ -0.34
CACNB1-206ENST00000539338 ZNF275Q9NSD4 429 aaPredicted RBP12.93□□□□□ -0.34
CACNB1-206ENST00000539338 PCM1Q15154 2024 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 RAG2P55895 527 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 GNB1P62873 340 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 OR2W3Q7Z3T1 314 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 DUSP18Q8NEJ0 188 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 MITD1Q8WV92 249 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 APOBEC3DQ96AK3 386 aaPredicted RBP12.93□□□□□ -0.34
CACNB1-206ENST00000539338 GPA33Q99795 319 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 V9GYS6 101 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 ANKRD20A5PA0PJZ0 165 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 OR5H15A6NDH6 313 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 SLC37A1P57057 533 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 FUT7Q11130 342 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 CT55Q8WUE5 264 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 ERGIC1Q969X5 290 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 SPSB1Q96BD6 273 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 PLPPR2Q96GM1 343 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 SMIM7Q9BQ49 75 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 COL4A5P29400 1685 aa12.93□□□□□ -0.34
CACNB1-206ENST00000539338 MESTQ5EB52 335 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.92□□□□□ -0.34
CACNB1-206ENST00000539338 CXorf67Q86X51 503 aaPredicted RBP12.92□□□□□ -0.34
CACNB1-206ENST00000539338 OR1J1Q8NGS3 322 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 KISS1RQ969F8 398 aaPredicted RBP12.92□□□□□ -0.34
CACNB1-206ENST00000539338 PILRBQ9UKJ0 227 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 C9orf170A2RU37 121 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 GPR31O00270 319 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 DHRS3O75911 302 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 S100A7P31151 101 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 KRTCAP3Q53RY4 240 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 ZNF764Q96H86 408 aaPredicted RBP12.92□□□□□ -0.34
CACNB1-206ENST00000539338 CLEC18AA5D8T8 446 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 ADAM10O14672 748 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 PATE4P0C8F1 98 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 CLEC18CQ8NCF0 446 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 SAT2Q96F10 170 aaPredicted RBP12.92□□□□□ -0.34
CACNB1-206ENST00000539338 IGHA1P01876 353 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 SFTA3P0C7M3 94 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 RD3LP0DJH9 198 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 RPS16P62249 146 aaKnown RBP12.92□□□□□ -0.34
CACNB1-206ENST00000539338 TLE1Q04724 770 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 IRF3Q14653 427 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 MRGPREQ86SM8 312 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 TMEM105Q8N8V8 129 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 NPEPL1Q8NDH3 523 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 VSTM2LQ96N03 204 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
CACNB1-206ENST00000539338 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 MEX3AA1L020 520 aaKnown RBP12.92□□□□□ -0.34
CACNB1-206ENST00000539338 RNASEK-C17orf49H0YIS7 233 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 ZP3P21754 424 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 ZNF718Q3SXZ3 478 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 DRAM2Q6UX65 266 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 PINX1Q96BK5 328 aaKnown RBP12.92□□□□□ -0.34
CACNB1-206ENST00000539338 CABLES2Q9BTV7 478 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 FRRS1LQ9P0K9 344 aa12.92□□□□□ -0.34
CACNB1-206ENST00000539338 A0A1W2PR80 420 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 NPIPB8E9PQR5 432 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 ZNF32P17041 273 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 RAB32Q13637 225 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 PWWP2BQ6NUJ5 590 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 DEGS2Q6QHC5 323 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 OR10X1Q8NGY0 326 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 TRPM6Q9BX84 2022 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 CDC14BO60729 498 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 SLC25A6P12236 298 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 CXCL3P19876 107 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 ZNF90Q03938 601 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 ACOT6Q3I5F7 207 aaPredicted RBP12.91□□□□□ -0.34
CACNB1-206ENST00000539338 PRSS42Q7Z5A4 293 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 SPICQ8N5J4 248 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 C20orf202A1L168 122 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 OGG1O15527 345 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 TRAF3IP2O43734 574 aaPredicted RBP12.91□□□□□ -0.34
CACNB1-206ENST00000539338 SFT2D2O95562 160 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 HPP00738 406 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms