RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ZNF529Q6P280 563 aa11.36□□□□□ -0.59
CD9-208ENST00000538834 DUX4L9Q6RFH8 374 aaPredicted RBP11.36□□□□□ -0.59
CD9-208ENST00000538834 ZNF771Q7L3S4 317 aaPredicted RBP11.36□□□□□ -0.59
CD9-208ENST00000538834 COMMD2Q86X83 199 aa11.36□□□□□ -0.59
CD9-208ENST00000538834 ZNF573Q86YE8 665 aa11.36□□□□□ -0.59
CD9-208ENST00000538834 C8orf59Q8N0T1 100 aaPredicted RBP11.36□□□□□ -0.59
CD9-208ENST00000538834 TEX29Q8N6K0 151 aa11.36□□□□□ -0.59
CD9-208ENST00000538834 C8orf46Q8TAG6 207 aa11.36□□□□□ -0.59
CD9-208ENST00000538834 ZNF671Q8TAW3 534 aa11.36□□□□□ -0.59
CD9-208ENST00000538834 MDFIQ99750 246 aa11.36□□□□□ -0.59
CD9-208ENST00000538834 NRIP2Q9BQI9 281 aa11.36□□□□□ -0.59
CD9-208ENST00000538834 SEBOXQ9HB31 216 aaPredicted RBP11.36□□□□□ -0.59
CD9-208ENST00000538834 CNOT2Q9NZN8 540 aaKnown RBP11.36□□□□□ -0.59
CD9-208ENST00000538834 DUX4Q9UBX2 424 aa11.36□□□□□ -0.59
CD9-208ENST00000538834 HHLA2Q9UM44 414 aa11.36□□□□□ -0.59
CD9-208ENST00000538834 SIRT4Q9Y6E7 314 aaPredicted RBP11.36□□□□□ -0.59
CD9-208ENST00000538834 DVL1O14640 695 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 GPR37O15354 613 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 LALBAP00709 142 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 PLATP00750 562 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 RPSAP08865 295 aaKnown RBP11.35□□□□□ -0.59
CD9-208ENST00000538834 PSG2P11465 335 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 FUT6P51993 359 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 DOC2BQ14184 412 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 RNLSQ5VYX0 342 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 ASPHD2Q6ICH7 369 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 HAGHLQ6PII5 290 aaPredicted RBP11.35□□□□□ -0.59
CD9-208ENST00000538834 ACP7Q6ZNF0 438 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 C9orf139Q6ZV77 190 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 FGFRL1Q8N441 504 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 PARP16Q8N5Y8 322 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 BOLLQ8N9W6 283 aaKnown RBP11.35□□□□□ -0.59
CD9-208ENST00000538834 OR52N1Q8NH53 320 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 NANPQ8TBE9 248 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 RGP1Q92546 391 aaPredicted RBP11.35□□□□□ -0.59
CD9-208ENST00000538834 SDSLQ96GA7 329 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 GAFA1Q96PS6 74 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 RASSF4Q9H2L5 321 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 OR5V1Q9UGF6 321 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 CLEC2DQ9UHP7 191 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 MAB21L2Q9Y586 359 aa11.35□□□□□ -0.59
CD9-208ENST00000538834 A0A0A6YYJ9 748 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 ERICH4A6NGS2 130 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 TMEM212A6NML5 194 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 OR2AT4A6NND4 320 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 SIGLEC5O15389 551 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 GATBO75879 557 aaKnown RBP11.34□□□□□ -0.59
CD9-208ENST00000538834 ECDO95905 644 aaPredicted RBP11.34□□□□□ -0.59
CD9-208ENST00000538834 LIPFP07098 398 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 ATF1P18846 271 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 HAAOP46952 286 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 GTF2A1P52655 376 aaPredicted RBP11.34□□□□□ -0.59
CD9-208ENST00000538834 AQP4P55087 323 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 CAV3P56539 151 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 ST3GAL4Q11206 333 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 OR2G6Q5TZ20 316 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 CD276Q5ZPR3 534 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 RPL22L1Q6P5R6 122 aaKnown RBP11.34□□□□□ -0.59
CD9-208ENST00000538834 USP43Q70EL4 1123 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 TMEM80Q96HE8 168 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 CCL13Q99616 98 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 NUDT16L1Q9BRJ7 211 aaKnown RBP11.34□□□□□ -0.59
CD9-208ENST00000538834 SIRPDQ9H106 197 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 MTCH1Q9NZJ7 389 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 NLKQ9UBE8 527 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 METRNQ9UJH8 293 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 EXOSC1Q9Y3B2 195 aaKnown RBP11.34□□□□□ -0.59
CD9-208ENST00000538834 AUP1Q9Y679 476 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 STAB1Q9NY15 2570 aa11.34□□□□□ -0.59
CD9-208ENST00000538834 EFCAB10A6NFE3 127 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 TMPRSS2O15393 492 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 ENSAO43768 121 aaKnown RBP11.33□□□□□ -0.6
CD9-208ENST00000538834 XPNPEP2O43895 674 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 CCDC159P0C7I6 412 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 GLRA1P23415 457 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 GBX2P52951 348 aaPredicted RBP11.33□□□□□ -0.6
CD9-208ENST00000538834 CDK5R1Q15078 307 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 DGUOKQ16854 277 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 DMKNQ6E0U4 476 aaPredicted RBP11.33□□□□□ -0.6
CD9-208ENST00000538834 KCTD8Q6ZWB6 473 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 SLC36A1Q7Z2H8 476 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 RNF144BQ7Z419 303 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 ANGPTL5Q86XS5 388 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 CD177Q8N6Q3 437 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 FAM216BQ8N7L0 139 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 OR5T2Q8NGG2 359 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 OR5AK2Q8NH90 309 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 FGGYQ96C11 551 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 PDCD1LG2Q9BQ51 273 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 PRDM13Q9H4Q3 707 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 BABAM2Q9NXR7 383 aa11.33□□□□□ -0.6
CD9-208ENST00000538834 RPUSD1Q9UJJ7 312 aaKnown RBP11.33□□□□□ -0.6
CD9-208ENST00000538834 F8VVB4 439 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 F8VWA3 439 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 H3BSH0 61 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 CD1AP06126 327 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 SELLP14151 372 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 EPHA1P21709 976 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 MYF6P23409 242 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 SRP14P37108 136 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms