RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 OR8G5Q8NG78 346 aa16.33■□□□□ 0.21
SFSWAP-207ENST00000538548 SLC37A2Q8TED4 501 aa16.33■□□□□ 0.21
SFSWAP-207ENST00000538548 JSRP1Q96MG2 331 aaPredicted RBP16.33■□□□□ 0.21
SFSWAP-207ENST00000538548 PECRQ9BY49 303 aa16.33■□□□□ 0.21
SFSWAP-207ENST00000538548 MTIF3Q9H2K0 278 aaKnown RBP16.33■□□□□ 0.21
SFSWAP-207ENST00000538548 TCFL5Q9UL49 500 aa16.33■□□□□ 0.21
SFSWAP-207ENST00000538548 TERTO14746 1132 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 HSD17B6O14756 317 aa16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 XRCC2O43543 280 aa16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 BTF3P20290 206 aaKnown RBP16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 ZP4Q12836 540 aa16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 BEND4Q6ZU67 534 aa16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 CCDC54Q8NEL0 328 aa16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 STT3BQ8TCJ2 826 aa16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 SSC4DQ8WTU2 575 aa16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 SSX3Q99909 188 aa16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 ZNF701Q9NV72 531 aaPredicted RBP16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 PADI1Q9ULC6 663 aa16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 URGCP-MRPS24S4R325 110 aa16.33■□□□□ 0.2
SFSWAP-207ENST00000538548 NSG1A0A0A6YYJ2 146 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 C5orf67F2Z3F1 127 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 PAX1P15863 534 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 DLK1P80370 383 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 IL13RA2Q14627 380 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 ARL6IP1Q15041 203 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 PDZD11Q5EBL8 140 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 TANGO2Q6ICL3 276 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 UNQ6494/PRO21346Q6UXR6 183 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 M1APQ8TC57 530 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 C2orf88Q9BSF0 95 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 SOX7Q9BT81 388 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 OBP2AQ9NY56 170 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 HS3ST3B1Q9Y662 390 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 GON4LQ3T8J9 2241 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 NPIPB13A6NJU9 1138 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 NPIPB4C9JG80 1138 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 CYB5BO43169 146 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 DIRAS3O95661 229 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 TRGC2P03986 189 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 COL13A1Q5TAT6 717 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 GPR119Q8TDV5 335 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 GPR84Q9NQS5 396 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 IGKV1D-8A0A087WSZ0 117 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 TGIF2-C20orf24A0A0A6YYL0 155 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 CDC14CA4D256 554 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 CA11O75493 328 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 ZNF17P17021 662 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 SPCS3P61009 180 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 NHLH2Q02577 135 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 POU3F1Q03052 451 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 PPA1Q15181 289 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 RTL6Q6ICC9 239 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 OR2T2Q6IF00 324 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 MED29Q9NX70 200 aa16.32■□□□□ 0.2
SFSWAP-207ENST00000538548 SRP19P09132 144 aaKnown RBP16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 FABP4P15090 132 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 RND3P61587 244 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 CCL20P78556 96 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 PRO1933Q9H354 126 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 TCEAL2Q9H3H9 227 aaPredicted RBP16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 KIAA1456Q9P272 454 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 C2orf16Q68DN1 1984 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 KIR2DS5A0A0G2JLQ3 304 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 A0A0G2JNG1 304 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 H0YL77 283 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 KIR2DS3K7RE56 304 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 ADAM10O14672 748 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 TSPAN2O60636 221 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 IGKV3-11P04433 115 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 KLK2P20151 261 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 PIGPP57054 158 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 HSF1Q00613 529 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 KIR2DS5Q14953 304 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 ZNF429Q86V71 674 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 OR8B12Q8NGG6 310 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 OR5R1Q8NH85 324 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 TVP23CQ96ET8 276 aa16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 FAM71F1Q96KD3 344 aaPredicted RBP16.31■□□□□ 0.2
SFSWAP-207ENST00000538548 VPS13AQ96RL7 3174 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 DHRS7CA6NNS2 312 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 KIR2DL1P43626 348 aaPredicted RBP16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 GLIPR1P48060 266 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 DCAF7P61962 342 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 TMEM187Q14656 261 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 HAGHQ16775 308 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 SPSB3Q6PJ21 355 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 H1FNTQ75WM6 255 aaPredicted RBP16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 LURAP1Q96LR2 239 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 TGIF2Q9GZN2 237 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 IGKV1-9A0A0C4DH69 117 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 ST8SIA3O43173 380 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 ATXN8OSP0DMR3 200 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 ALDH3B1P43353 468 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 LRTM2Q8N967 370 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 OR10AD1Q8NGE0 317 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 GPBAR1Q8TDU6 330 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 NIPSNAP3BQ9BS92 247 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 NAA60Q9H7X0 242 aa16.3■□□□□ 0.2
SFSWAP-207ENST00000538548 METTL12A8MUP2 240 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 MKRN2OSH3BPM6 223 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms