RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 DCAF12L2Q5VW00 463 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 PLCXD3Q63HM9 321 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 C11orf87Q6NUJ2 197 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 COLCA1Q6ZS62 124 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 ZNF546Q86UE3 836 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 CCDC28AQ8IWP9 274 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 SKA3Q8IX90 412 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 SAXO1Q8IYX7 474 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 OSR2Q8N2R0 312 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 KCNRGQ8N5I3 272 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 TMEM251Q8N6I4 163 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 INO80EQ8NBZ0 244 aaPredicted RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 OR5D18Q8NGL1 313 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 LILRB1Q8NHL6 650 aaPredicted RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 AKR7LQ8NHP1 331 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 MARCH1Q8TCQ1 289 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 APOBEC3DQ96AK3 386 aaPredicted RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 MRGPRFQ96AM1 343 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 ZNF837Q96EG3 531 aaPredicted RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 PHYHIPLQ96FC7 376 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 ZNF845Q96IR2 970 aaPredicted RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 VRK1Q99986 396 aaPredicted RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 AIFM2Q9BRQ8 373 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 NMES1Q9C002 83 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 NECAP2Q9NVZ3 263 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 PLEKHJ1Q9NW61 149 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 EHFQ9NZC4 300 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 PFDN2Q9UHV9 154 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 GPR132Q9UNW8 380 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 OSGIN2Q9Y236 505 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 ZNF175Q9Y473 711 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 R4GN57 208 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 MED12Q93074 2177 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 VCANP13611 3396 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 LOC100509620A0A075B734 347 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 TRAV14DV4A0A0A6YYC5 116 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 A0A1W2PNU3 283 aaPredicted RBP5.76□□□□□ -1.49
USP28-206ENST00000538224 A0A1W2PP11 408 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 FAM230AA0A1W2PPH8 454 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 C5orf51A6NDU8 294 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 DBX1A6NMT0 343 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 FAM166BA8MTA8 275 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 BCL2L11O43521 198 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 RAD51DO75771 328 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 RRASP10301 218 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 PGAM2P15259 253 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 AKR1C4P17516 323 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 CTRB1P17538 263 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 GABRR1P24046 479 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 CHATP28329 748 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 MPGP29372 298 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 B2MP61769 119 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 ARG2P78540 354 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 ARF1P84077 181 aaKnown RBP5.76□□□□□ -1.49
USP28-206ENST00000538224 SRYQ05066 204 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 PDZK1IP1Q13113 114 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 TRIP6Q15654 476 aaKnown RBP5.76□□□□□ -1.49
USP28-206ENST00000538224 C2orf68Q2NKX9 166 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 CTRB2Q6GPI1 263 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 MYO7BQ6PIF6 2116 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 CRIP3Q6Q6R5 217 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 C17orf107Q6ZR85 190 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 LINC00696Q6ZRV3 163 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 ACOT7LQ6ZUV0 252 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 OVCH2Q7RTZ1 564 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 MRPL21Q7Z2W9 205 aaKnown RBP5.76□□□□□ -1.49
USP28-206ENST00000538224 PIP4P1Q86T03 277 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 LINC00596Q86U02 117 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 COMMD7Q86VX2 200 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 CCDC36Q8IYA8 594 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 ZDHHC23Q8IYP9 409 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 OR5L1Q8NGL2 311 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 OR2AE1Q8NHA4 323 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 CASTOR1Q8WTX7 329 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 ZNF775Q96BV0 537 aaPredicted RBP5.76□□□□□ -1.49
USP28-206ENST00000538224 WDR89Q96FK6 387 aaPredicted RBP5.76□□□□□ -1.49
USP28-206ENST00000538224 CITED4Q96RK1 184 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 CMSS1Q9BQ75 279 aaKnown RBP5.76□□□□□ -1.49
USP28-206ENST00000538224 SLC25A32Q9H2D1 315 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 SLC6A15Q9H2J7 730 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 PLK3Q9H4B4 646 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 RHOFQ9HBH0 211 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 ZNF286AQ9HBT8 521 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 GLRX2Q9NS18 164 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 SLC7A10Q9NS82 523 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 ZNF701Q9NV72 531 aaPredicted RBP5.76□□□□□ -1.49
USP28-206ENST00000538224 FAM86C1Q9NVL1 165 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 C1orf123Q9NWV4 160 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 ANXA10Q9UJ72 324 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 TNFSF18Q9UNG2 199 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 A0A0C4DFX4 3053 aa5.76□□□□□ -1.49
USP28-206ENST00000538224 TRGV5A0A0B4J1U4 118 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 PIGBOS1A0A0B4J2F0 54 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 hCG_1807616A0A1W2PRN6 198 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 C5orf63A6NC05 138 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 PDCD6O75340 191 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 F10P00742 488 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 CST4P01036 141 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 CRHP06850 196 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 CTSDP07339 412 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms