RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ARR3P36575 388 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 SOX8P57073 446 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 TMEM65Q6PI78 240 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 KCTD9Q7L273 389 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 MAFIPQ8WZ33 124 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 MRPS24Q96EL2 167 aaKnown RBP13.57□□□□□ -0.24
MKS1-204ENST00000537529 GSX2Q9BZM3 304 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 C5orf66Q9H5L9 145 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 EDARQ9UNE0 448 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 FAM25EA8MYX2 175 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 B3GALNT1O75752 331 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 SLC25A4P12235 298 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 PDZK1IP1Q13113 114 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 TGIF1Q15583 401 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 NSUN5P2Q63ZY6 315 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 GSG1LQ6UXU4 331 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 ZNF546Q86UE3 836 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 DEFB124Q8NES8 71 aa13.57□□□□□ -0.24
MKS1-204ENST00000537529 TRGV5A0A0B4J1U4 118 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 CDRT15L2A8MXV6 281 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 SDCBPO00560 298 aaPredicted RBP13.56□□□□□ -0.24
MKS1-204ENST00000537529 RRP8O43159 456 aaKnown RBP13.56□□□□□ -0.24
MKS1-204ENST00000537529 FTH1P19P0C7X4 201 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 CD79AP11912 226 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 ECI1P42126 302 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 ARPC4P59998 168 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 MALLQ13021 153 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 CAMK2BQ13554 666 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 SURF2Q15527 256 aaPredicted RBP13.56□□□□□ -0.24
MKS1-204ENST00000537529 TAF9Q16594 264 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 OVCH2Q7RTZ1 564 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 NUFIP2Q7Z417 695 aaKnown RBP13.56□□□□□ -0.24
MKS1-204ENST00000537529 OSR2Q8N2R0 312 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 DEFB127Q9H1M4 99 aa13.56□□□□□ -0.24
MKS1-204ENST00000537529 A0A0B4J2A0 478 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 A0A0D9SG52 128 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 C5orf49A4QMS7 147 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 DBX1A6NMT0 343 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 SFT2D2O95562 160 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 CCNOP22674 350 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 DTYMKP23919 212 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 CHATP28329 748 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 FOXG1P55316 489 aaPredicted RBP13.55□□□□□ -0.24
MKS1-204ENST00000537529 NHLRC3Q5JS37 347 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 AADACL3Q5VUY0 350 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 SIGIRRQ6IA17 410 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 C11orf87Q6NUJ2 197 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 RPUSD3Q6P087 351 aaKnown RBP13.55□□□□□ -0.24
MKS1-204ENST00000537529 RFPL4BQ6ZWI9 263 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 DPPA2Q7Z7J5 298 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 TMEM230Q96A57 120 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 APOBEC3DQ96AK3 386 aaPredicted RBP13.55□□□□□ -0.24
MKS1-204ENST00000537529 SEC22AQ96IW7 307 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 PARD6AQ9NPB6 346 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 SHPKQ9UHJ6 478 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 KIF25Q9UIL4 384 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 IGKV1-12A0A0C4DH73 117 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 ZNF850A8MQ14 1090 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 IGKV1D-12P01611 117 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 PLP2Q04941 152 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 THOC7Q6I9Y2 204 aaKnown RBP13.55□□□□□ -0.24
MKS1-204ENST00000537529 MRPL21Q7Z2W9 205 aaKnown RBP13.55□□□□□ -0.24
MKS1-204ENST00000537529 COMMD7Q86VX2 200 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 ZSCAN4Q8NAM6 433 aaPredicted RBP13.55□□□□□ -0.24
MKS1-204ENST00000537529 OR56B2PQ8NGI1 322 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 OR6K3Q8NGY3 331 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 COQ8AQ8NI60 647 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 PPP1R1CQ8WVI7 109 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 WDYHV1Q96HA8 205 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 FAAP24Q9BTP7 215 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 REPIN1Q9BWE0 567 aaKnown RBP13.55□□□□□ -0.24
MKS1-204ENST00000537529 AK3Q9UIJ7 227 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 NCOR1O75376 2440 aa13.55□□□□□ -0.24
MKS1-204ENST00000537529 C5orf51A6NDU8 294 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 ZNF345Q14585 488 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 SLC51BQ86UW2 128 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 FBXL14Q8N1E6 418 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 OR51F2Q8NH61 342 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 SCARB1Q8WTV0 552 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 CMSS1Q9BQ75 279 aaKnown RBP13.54□□□□□ -0.24
MKS1-204ENST00000537529 RTBDNQ9BSG5 229 aaPredicted RBP13.54□□□□□ -0.24
MKS1-204ENST00000537529 HDHD3Q9BSH5 251 aaPredicted RBP13.54□□□□□ -0.24
MKS1-204ENST00000537529 PAPOLGQ9BWT3 736 aaKnown RBP13.54□□□□□ -0.24
MKS1-204ENST00000537529 SPRR3Q9UBC9 169 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 TNFSF18Q9UNG2 199 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 C14orf166Q9Y224 244 aaKnown RBP13.54□□□□□ -0.24
MKS1-204ENST00000537529 BDP1A6H8Y1 2624 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 AHCTF1Q8WYP5 2266 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 SPAARA0A1B0GVQ0 90 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 SLC22A20A6NK97 555 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 OR2F2O95006 317 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 PGAM2P15259 253 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 MPGP29372 298 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 AP2S1P53680 142 aaPredicted RBP13.54□□□□□ -0.24
MKS1-204ENST00000537529 RAB1AP62820 205 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 CYCSP99999 105 aaKnown RBP13.54□□□□□ -0.24
MKS1-204ENST00000537529 BAMBIQ13145 260 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 OR2F1Q13607 317 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 PIGYQ3MUY2 71 aa13.54□□□□□ -0.24
MKS1-204ENST00000537529 LRRC37A5PQ49AS3 106 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms