RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 TMEM64Q6YI46 380 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 COX18Q8N8Q8 333 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 MCHR2Q969V1 340 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 FAM46BQ96A09 425 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 OR7D2Q96RA2 312 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 PCGF1Q9BSM1 259 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 NMNAT2Q9BZQ4 307 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 KIAA1456Q9P272 454 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 FITM1A5D6W6 292 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 GLOD5A6NK44 160 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 PATE3B3GLJ2 98 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 TNFSF13O75888 250 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 HBE1P02100 147 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 OR5G3P0C626 314 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 CCKBRP32239 447 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 AGERQ15109 404 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 OR56B2PQ8NGI1 322 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 OR5AR1Q8NGP9 310 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 Q96M85 177 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 GLIPR2Q9H4G4 154 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 B3GAT1Q9P2W7 334 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 RARRES3Q9UL19 164 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 LAMP3Q9UQV4 416 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 LTBP2Q14767 1821 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 TRAV39A0A0B4J263 110 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 PRSS38A1L453 326 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 H3BSH0 61 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 P2RY1P47900 373 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 RND2P52198 227 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 CFAP161Q6P656 301 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 OR8G5Q8NG78 346 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 WDR34Q96EX3 536 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 SCRT1Q9BWW7 348 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 SLC7A11Q9UPY5 501 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 ASXL3Q9C0F0 2248 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 RNF212BA8MTL3 300 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 B3GALT2O43825 422 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 CEACAM1P13688 526 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 EPHA8P29322 1005 aaPredicted RBP9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 GUCA1AP43080 201 aaPredicted RBP9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 RPL23AP62750 156 aaKnown RBP9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 HSF1Q00613 529 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 B4GALNT1Q00973 533 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 CLEC18BQ6UXF7 455 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 CYB561D1Q8N8Q1 229 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 APCDD1LQ8NCL9 501 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 PRSS33Q8NF86 280 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 OR52E1Q8NGJ3 308 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 CSTL1Q9H114 145 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 KCNK15Q9H427 330 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 C1orf123Q9NWV4 160 aa9.65□□□□□ -0.87
CLSTN3-207ENST00000537408 A0A1W2PQF6 199 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 CCL25O15444 150 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 C8orf89P0DMQ9 161 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 ELLP55199 621 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 SLC23A3Q6PIS1 610 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 DHRS13Q6UX07 377 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 RCBTB1Q8NDN9 531 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 KTI12Q96EK9 354 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 MTHFD2LQ9H903 347 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 P4HTMQ9NXG6 502 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 TRBV5-7A0A0A0MS05 114 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 SPAARA0A1B0GVQ0 90 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 E5RGE8 158 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF264O43296 627 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 NDUFB2O95178 105 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 MDKP21741 143 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 PRLHRP49683 370 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 FHITP49789 147 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 RAB28P51157 221 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 ENDOGQ14249 297 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 NOXO1Q8NFA2 376 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 THAP3Q8WTV1 239 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 RNF2Q99496 336 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 C14orf166Q9Y224 244 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 OSGIN2Q9Y236 505 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 NSG2Q9Y328 171 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 SLCO2B1O94956 709 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 CSRP1P21291 193 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 VASPP50552 380 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 EIF3IQ13347 325 aaKnown RBP9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 OR1Q1Q15612 314 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 TMEM41BQ5BJD5 291 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 RNF128Q8TEB7 428 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 TNFRSF13CQ96RJ3 184 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 ABI3Q9P2A4 366 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 HSF4Q9ULV5 492 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 ICAM5Q9UMF0 924 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 POLR1DQ9Y2S0 133 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 OR51B4Q9Y5P0 310 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 IER3IP1Q9Y5U9 82 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 LIPGQ9Y5X9 500 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 CEP350Q5VT06 3117 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 GVINP1Q7Z2Y8 2422 aa9.64□□□□□ -0.87
CLSTN3-207ENST00000537408 MEGF11A6BM72 1044 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 GPR137BO60478 399 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 FAM3BP58499 235 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 RND3P61587 244 aa9.63□□□□□ -0.87
CLSTN3-207ENST00000537408 AGBL4Q5VU57 503 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms